Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
USP11P51784 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.5□□□□□ -1.53
USP11P51784 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 AL139276.1-201ENST00000311910 1001 ntBASIC5.5□□□□□ -1.53
USP11P51784 AL161781.1-201ENST00000354277 403 ntBASIC5.5□□□□□ -1.53
USP11P51784 RNU6-552P-201ENST00000362869 119 ntBASIC5.5□□□□□ -1.53
USP11P51784 RNU5E-8P-201ENST00000363502 116 ntBASIC5.5□□□□□ -1.53
USP11P51784 Y_RNA.149-201ENST00000363558 117 ntBASIC5.5□□□□□ -1.53
USP11P51784 RNU1-85P-201ENST00000364127 164 ntBASIC5.5□□□□□ -1.53
USP11P51784 SNORA63.7-201ENST00000365579 123 ntBASIC5.5□□□□□ -1.53
USP11P51784 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 AC117470.1-201ENST00000381974 330 ntBASIC5.5□□□□□ -1.53
USP11P51784 RNU6-441P-201ENST00000384545 106 ntBASIC5.5□□□□□ -1.53
USP11P51784 AL356421.1-201ENST00000403255 413 ntBASIC5.5□□□□□ -1.53
USP11P51784 PRRC2CP1-201ENST00000404428 159 ntBASIC5.5□□□□□ -1.53
USP11P51784 RN7SKP216-201ENST00000411050 312 ntBASIC5.5□□□□□ -1.53
USP11P51784 RPL37P18-201ENST00000411602 243 ntBASIC5.5□□□□□ -1.53
USP11P51784 AL645608.4-201ENST00000423619 154 ntBASIC5.5□□□□□ -1.53
USP11P51784 AC096632.1-201ENST00000427395 310 ntBASIC5.5□□□□□ -1.53
USP11P51784 AC137499.1-201ENST00000427602 88 ntBASIC5.5□□□□□ -1.53
USP11P51784 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
USP11P51784 MTATP6P16-201ENST00000434543 526 ntBASIC5.5□□□□□ -1.53
USP11P51784 AL451139.1-201ENST00000434718 346 ntBASIC5.5□□□□□ -1.53
USP11P51784 RPL23AP74-201ENST00000437246 471 ntBASIC5.5□□□□□ -1.53
USP11P51784 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.5□□□□□ -1.53
USP11P51784 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.5□□□□□ -1.53
USP11P51784 RPS29P15-201ENST00000458329 171 ntBASIC5.5□□□□□ -1.53
USP11P51784 RPL23AP72-201ENST00000492447 435 ntBASIC5.5□□□□□ -1.53
USP11P51784 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.5□□□□□ -1.53
USP11P51784 RNU6-709P-201ENST00000517257 104 ntBASIC5.5□□□□□ -1.53
USP11P51784 SOD1P3-201ENST00000518682 454 ntBASIC5.5□□□□□ -1.53
USP11P51784 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.5□□□□□ -1.53
USP11P51784 AP000889.2-201ENST00000532684 490 ntBASIC5.5□□□□□ -1.53
USP11P51784 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.5□□□□□ -1.53
USP11P51784 AL161670.1-201ENST00000554348 137 ntBASIC5.5□□□□□ -1.53
USP11P51784 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 MIR3936-201ENST00000584304 110 ntBASIC5.5□□□□□ -1.53
USP11P51784 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.5□□□□□ -1.53
USP11P51784 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.5□□□□□ -1.53
USP11P51784 BNIP3P25-201ENST00000596023 559 ntBASIC5.5□□□□□ -1.53
USP11P51784 FAM25E-202ENST00000608562 189 ntBASIC5.5□□□□□ -1.53
USP11P51784 MIR6748-201ENST00000610433 71 ntBASIC5.5□□□□□ -1.53
USP11P51784 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.5□□□□□ -1.53
USP11P51784 Z69720.2-201ENST00000624755 279 ntBASIC5.5□□□□□ -1.53
USP11P51784 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 MTND5P10-201ENST00000603719 1809 ntBASIC5.5□□□□□ -1.53
USP11P51784 AL672167.1-204ENST00000641875 3017 ntBASIC5.5□□□□□ -1.53
USP11P51784 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USP11P51784 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP11P51784 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP11P51784 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP11P51784 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.49□□□□□ -1.53
USP11P51784 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP11P51784 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.49□□□□□ -1.53
USP11P51784 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP11P51784 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
USP11P51784 MIR649-201ENST00000384843 97 ntBASIC5.49□□□□□ -1.53
USP11P51784 U3.30-201ENST00000391308 210 ntBASIC5.49□□□□□ -1.53
USP11P51784 AL603908.1-201ENST00000406098 201 ntBASIC5.49□□□□□ -1.53
USP11P51784 AL606923.1-201ENST00000406616 190 ntBASIC5.49□□□□□ -1.53
USP11P51784 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
USP11P51784 MTCYBP10-201ENST00000424905 650 ntBASIC5.49□□□□□ -1.53
USP11P51784 NRBF2P3-201ENST00000432731 865 ntBASIC5.49□□□□□ -1.53
USP11P51784 RPS17P8-201ENST00000434525 335 ntBASIC5.49□□□□□ -1.53
USP11P51784 FABP5P14-201ENST00000437273 393 ntBASIC5.49□□□□□ -1.53
USP11P51784 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.49□□□□□ -1.53
USP11P51784 AL035666.1-201ENST00000446195 348 ntBASIC5.49□□□□□ -1.53
USP11P51784 RPL21P23-201ENST00000446654 460 ntBASIC5.49□□□□□ -1.53
USP11P51784 AL118520.1-201ENST00000450770 291 ntBASIC5.49□□□□□ -1.53
USP11P51784 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.49□□□□□ -1.53
USP11P51784 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.49□□□□□ -1.53
USP11P51784 AC005229.2-201ENST00000456995 399 ntBASIC5.49□□□□□ -1.53
USP11P51784 RPL30P15-201ENST00000457129 321 ntBASIC5.49□□□□□ -1.53
USP11P51784 RNU7-180P-201ENST00000459240 63 ntBASIC5.49□□□□□ -1.53
USP11P51784 RPL35AP28-201ENST00000459730 331 ntBASIC5.49□□□□□ -1.53
USP11P51784 AP000893.1-201ENST00000474462 794 ntBASIC5.49□□□□□ -1.53
USP11P51784 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.49□□□□□ -1.53
USP11P51784 RN7SKP24-201ENST00000515888 284 ntBASIC5.49□□□□□ -1.53
USP11P51784 RNU6-764P-201ENST00000516396 105 ntBASIC5.49□□□□□ -1.53
USP11P51784 RNU6-566P-201ENST00000516790 107 ntBASIC5.49□□□□□ -1.53
USP11P51784 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.49□□□□□ -1.53
USP11P51784 AC128657.1-201ENST00000549459 145 ntBASIC5.49□□□□□ -1.53
USP11P51784 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.49□□□□□ -1.53
USP11P51784 MIR4775-201ENST00000581168 75 ntBASIC5.49□□□□□ -1.53
USP11P51784 MIR4480-201ENST00000582492 71 ntBASIC5.49□□□□□ -1.53
USP11P51784 AF038458.1-201ENST00000588406 262 ntBASIC5.49□□□□□ -1.53
USP11P51784 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC5.49□□□□□ -1.53
USP11P51784 OR6R2P-201ENST00000609216 300 ntBASIC5.49□□□□□ -1.53
USP11P51784 AC083806.3-201ENST00000614016 455 ntBASIC5.49□□□□□ -1.53
USP11P51784 uc_338.12-201ENST00000616344 181 ntBASIC5.49□□□□□ -1.53
USP11P51784 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.49□□□□□ -1.53
USP11P51784 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USP11P51784 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.49□□□□□ -1.53
USP11P51784 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USP11P51784 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.49□□□□□ -1.53
USP11P51784 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.49□□□□□ -1.53
USP11P51784 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms