Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 CYCSP34-201ENST00000458172 304 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 snoU13.20-201ENST00000459180 104 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 RPS4XP20-201ENST00000505751 772 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 AC097486.1-201ENST00000515331 210 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 RNU6-120P-201ENST00000516077 103 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 MIR4293-201ENST00000584305 78 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 AC011447.4-201ENST00000587562 111 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC7.08□□□□□ -1.28
PRIM1P49642 AC006115.2-201ENST00000596823 202 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 MIR378J-201ENST00000611988 109 ntBASIC7.08□□□□□ -1.28
PRIM1P49642 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PRIM1P49642 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
PRIM1P49642 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC7.08□□□□□ -1.28
PRIM1P49642 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.08□□□□□ -1.28
PRIM1P49642 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
PRIM1P49642 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.07□□□□□ -1.28
PRIM1P49642 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PRIM1P49642 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PRIM1P49642 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PRIM1P49642 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PRIM1P49642 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
PRIM1P49642 SNORD1C-201ENST00000363315 78 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 RNU6-596P-201ENST00000365395 98 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 RNU6-378P-201ENST00000384324 107 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 MORN2-203ENST00000409131 544 ntTSL 5 BASIC7.07□□□□□ -1.28
PRIM1P49642 AC096921.1-201ENST00000411661 375 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 AL354868.1-201ENST00000417077 482 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 CRIP1P1-201ENST00000427567 185 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.07□□□□□ -1.28
PRIM1P49642 RPL12P17-201ENST00000432393 498 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC7.07□□□□□ -1.28
PRIM1P49642 AC092647.2-201ENST00000452998 253 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC7.07□□□□□ -1.28
PRIM1P49642 AC087884.1-201ENST00000469738 328 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 RPL31P60-201ENST00000478450 367 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 TRBV5-2-201ENST00000489095 273 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC7.07□□□□□ -1.28
PRIM1P49642 AC084783.1-201ENST00000565846 910 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 MIR548AI-201ENST00000579940 88 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 AC174048.1-201ENST00000603389 144 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 AC130454.1-201ENST00000622948 401 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.07□□□□□ -1.28
PRIM1P49642 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC7.07□□□□□ -1.28
PRIM1P49642 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PRIM1P49642 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PRIM1P49642 AC068870.1-201ENST00000563737 2455 ntBASIC7.07□□□□□ -1.28
PRIM1P49642 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PRIM1P49642 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
PRIM1P49642 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
PRIM1P49642 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 AC108751.5-201ENST00000492880 1336 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
PRIM1P49642 RNA5SP326-201ENST00000363209 110 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 U3.10-201ENST00000364459 214 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.06□□□□□ -1.28
PRIM1P49642 Y_RNA.464-201ENST00000384282 110 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 AL138885.1-201ENST00000405921 675 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 ELOCP20-201ENST00000422460 345 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.06□□□□□ -1.28
PRIM1P49642 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC7.06□□□□□ -1.28
PRIM1P49642 KRT8P51-201ENST00000438938 274 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 FTH1P25-201ENST00000447665 469 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 TPT1P13-201ENST00000449760 499 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 RN7SL738P-201ENST00000470264 297 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 TRBVB-201ENST00000477100 408 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC7.06□□□□□ -1.28
PRIM1P49642 RNU5B-3P-201ENST00000516601 115 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 IGKV2D-23-201ENST00000518179 286 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 AC090151.1-201ENST00000520784 730 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC7.06□□□□□ -1.28
PRIM1P49642 BNIP3P1-201ENST00000547295 580 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC7.06□□□□□ -1.28
PRIM1P49642 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC7.06□□□□□ -1.28
PRIM1P49642 VN1R91P-201ENST00000594377 169 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 AC012669.1-201ENST00000603209 283 ntBASIC7.06□□□□□ -1.28
PRIM1P49642 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.06□□□□□ -1.28
PRIM1P49642 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
PRIM1P49642 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.06□□□□□ -1.28
PRIM1P49642 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PRIM1P49642 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PRIM1P49642 Y_RNA.19-201ENST00000362462 99 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 RNU6-212P-201ENST00000362642 104 ntBASIC7.05□□□□□ -1.28
PRIM1P49642 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms