Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MTCO2P15-201ENST00000532655 656 ntBASIC3.34□□□□□ -1.87
BRCC3P46736 MTND4P33-201ENST00000556706 766 ntBASIC3.34□□□□□ -1.87
BRCC3P46736 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.34□□□□□ -1.87
BRCC3P46736 AC234772.3-201ENST00000602277 528 ntBASIC3.34□□□□□ -1.87
BRCC3P46736 GAS5-AS1-201ENST00000602767 694 ntBASIC3.34□□□□□ -1.87
BRCC3P46736 AC011330.2-201ENST00000621680 635 ntBASIC3.34□□□□□ -1.87
BRCC3P46736 AC073348.1-201ENST00000623002 331 ntBASIC3.34□□□□□ -1.87
BRCC3P46736 CR381572.1-201ENST00000625098 102 ntBASIC3.34□□□□□ -1.87
BRCC3P46736 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.87
BRCC3P46736 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
BRCC3P46736 ZNF826P-207ENST00000622273 1910 ntBASIC3.34□□□□□ -1.88
BRCC3P46736 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRCC3P46736 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRCC3P46736 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRCC3P46736 OR5H2-201ENST00000355273 945 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
BRCC3P46736 RNU6-1066P-201ENST00000363573 105 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 RNU6-339P-201ENST00000384310 107 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 RNU2-42P-201ENST00000410697 113 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AC092634.6-201ENST00000418558 192 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
BRCC3P46736 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.33□□□□□ -1.88
BRCC3P46736 MTCO2P20-201ENST00000437339 673 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.33□□□□□ -1.88
BRCC3P46736 AL831737.1-201ENST00000441288 271 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.33□□□□□ -1.88
BRCC3P46736 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.33□□□□□ -1.88
BRCC3P46736 Z73417.1-201ENST00000447373 778 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 RFC5P1-201ENST00000454419 874 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.33□□□□□ -1.88
BRCC3P46736 SYPL1P1-201ENST00000473622 768 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 RPL31P13-201ENST00000484151 370 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 RNU1-103P-201ENST00000516502 125 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 RN7SKP287-201ENST00000516546 266 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 SNORA48.10-201ENST00000516965 160 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AC087808.1-201ENST00000520501 361 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.33□□□□□ -1.88
BRCC3P46736 AP001317.1-201ENST00000531194 960 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AP003385.6-201ENST00000531603 374 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AP004242.1-201ENST00000533701 349 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.33□□□□□ -1.88
BRCC3P46736 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BRCC3P46736 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRCC3P46736 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.33□□□□□ -1.88
BRCC3P46736 AC009097.3-201ENST00000563557 1018 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AC107954.1-201ENST00000565906 727 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AC140725.3-201ENST00000616193 880 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AC009159.2-201ENST00000617603 606 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.33□□□□□ -1.88
BRCC3P46736 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.33□□□□□ -1.88
BRCC3P46736 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.33□□□□□ -1.88
BRCC3P46736 AC021755.1-201ENST00000559747 1447 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 ZNF876P-202ENST00000398732 1485 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
BRCC3P46736 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRCC3P46736 AC092326.2-201ENST00000624772 1561 ntBASIC3.33□□□□□ -1.88
BRCC3P46736 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BRCC3P46736 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRCC3P46736 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRCC3P46736 AC007256.1-201ENST00000392253 2765 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCC3P46736 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRCC3P46736 NACA3P-201ENST00000359690 648 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 Y_RNA.192-201ENST00000363977 102 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
BRCC3P46736 RNU6-657P-201ENST00000383904 107 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 RNU6-413P-201ENST00000384115 107 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 SNORD15B-201ENST00000384714 146 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 RPL31P1-201ENST00000398116 372 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 AL590084.1-201ENST00000407885 387 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 AL023807.1-201ENST00000407932 359 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 RPL23AP47-201ENST00000408017 460 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 RNA5SP80-201ENST00000410475 111 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.32□□□□□ -1.88
BRCC3P46736 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.32□□□□□ -1.88
BRCC3P46736 DPRXP1-201ENST00000426312 460 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCC3P46736 AC084290.1-201ENST00000434995 374 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 COX7BP2-201ENST00000437976 242 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.32□□□□□ -1.88
BRCC3P46736 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCC3P46736 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.32□□□□□ -1.88
BRCC3P46736 NECAP1P2-201ENST00000455668 727 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.32□□□□□ -1.88
BRCC3P46736 RPS3AP14-201ENST00000483907 780 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BRCC3P46736 MTCYBP16-201ENST00000509187 1129 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 MTCO3P44-201ENST00000510977 541 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 FABP5P12-201ENST00000515543 389 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.32□□□□□ -1.88
BRCC3P46736 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.32□□□□□ -1.88
BRCC3P46736 AC027309.2-201ENST00000520566 192 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.32□□□□□ -1.88
BRCC3P46736 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.32□□□□□ -1.88
BRCC3P46736 AP002404.1-201ENST00000532005 451 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 AC023538.1-201ENST00000534576 736 ntBASIC3.32□□□□□ -1.88
BRCC3P46736 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms