Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC079780.1-201ENST00000428259 207 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 ARL5AP4-201ENST00000430731 512 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AC234064.1-201ENST00000436312 247 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFSF9P41273 AL353718.1-201ENST00000451028 517 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 CDC42P1-201ENST00000456658 548 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 RPS20P24-201ENST00000457473 361 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 RN7SL429P-201ENST00000479090 223 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFSF9P41273 RN7SL489P-201ENST00000486185 223 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 RN7SL327P-201ENST00000488659 223 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 RN7SL283P-201ENST00000489055 303 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFSF9P41273 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFSF9P41273 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TNFSF9P41273 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TNFSF9P41273 MTCYBP37-201ENST00000510642 1133 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 SNORA9.3-201ENST00000516383 129 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFSF9P41273 OR4P1P-201ENST00000530808 1136 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AP000857.1-201ENST00000532151 543 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.91□□□□□ -1.94
TNFSF9P41273 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFSF9P41273 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFSF9P41273 COX6CP3-201ENST00000580869 223 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AC133794.1-201ENST00000602731 914 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 NRBF2P5-201ENST00000603087 788 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AC012119.1-201ENST00000603184 222 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AP001330.4-201ENST00000604350 154 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AL110115.1-201ENST00000614396 364 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 RN7SL853P-201ENST00000617250 223 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 AC040168.1-201ENST00000623594 991 ntBASIC2.91□□□□□ -1.94
TNFSF9P41273 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFSF9P41273 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TNFSF9P41273 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFSF9P41273 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
TNFSF9P41273 TAB3P1-202ENST00000452645 1634 ntBASIC2.9□□□□□ -1.94
TNFSF9P41273 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.9□□□□□ -1.94
TNFSF9P41273 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFSF9P41273 AC244517.1-201ENST00000606030 2086 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AL161431.1-201ENST00000618966 4205 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 RNU6-859P-201ENST00000362728 107 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AL031679.1-201ENST00000400616 525 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AL590004.2-201ENST00000404787 371 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TNFSF9P41273 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFSF9P41273 AC019097.1-201ENST00000424783 735 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AC063976.3-201ENST00000426849 329 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFSF9P41273 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.9□□□□□ -1.95
TNFSF9P41273 PTGES3P5-201ENST00000455109 434 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 TRBV26-201ENST00000456572 344 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 HMGB1P25-201ENST00000468402 607 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFSF9P41273 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFSF9P41273 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFSF9P41273 RNU6-711P-201ENST00000517255 106 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AC093331.1-201ENST00000521474 169 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.9□□□□□ -1.95
TNFSF9P41273 SNRPGP1-201ENST00000553864 222 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.9□□□□□ -1.95
TNFSF9P41273 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.9□□□□□ -1.95
TNFSF9P41273 AC008277.2-201ENST00000605196 797 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AC008962.1-201ENST00000605729 304 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 AC097460.3-201ENST00000623099 442 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.9□□□□□ -1.95
TNFSF9P41273 SNORA50A-202ENST00000629536 136 ntBASIC2.9□□□□□ -1.95
TNFSF9P41273 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
TNFSF9P41273 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TNFSF9P41273 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
TNFSF9P41273 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFSF9P41273 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFSF9P41273 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFSF9P41273 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TNFSF9P41273 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFSF9P41273 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFSF9P41273 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TNFSF9P41273 RNU6-115P-201ENST00000364310 107 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFSF9P41273 OR1L1-202ENST00000373686 1083 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 RNU6-1074P-201ENST00000383995 104 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 AL512633.1-201ENST00000399931 655 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFSF9P41273 MTND4P15-201ENST00000437913 1033 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFSF9P41273 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TNFSF9P41273 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.89□□□□□ -1.95
TNFSF9P41273 RNU7-140P-201ENST00000459546 60 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 AC103975.1-201ENST00000482506 483 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 MLLT10P2-201ENST00000506434 249 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.89□□□□□ -1.95
TNFSF9P41273 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.89□□□□□ -1.95
TNFSF9P41273 AP000790.1-201ENST00000528891 737 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 ZNF705CP-201ENST00000530515 889 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 SNRPGP16-201ENST00000533275 226 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFSF9P41273 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.89□□□□□ -1.95
TNFSF9P41273 MTCO1P40-201ENST00000574371 625 ntBASIC2.89□□□□□ -1.95
TNFSF9P41273 MIR4635-201ENST00000583759 79 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms