Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPL29P29-201ENST00000448725 423 ntBASIC3.23□□□□□ -1.89
SHC1P29353 EPS15P1-201ENST00000448836 336 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RPL36AP33-201ENST00000450395 310 ntBASIC3.23□□□□□ -1.89
SHC1P29353 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC1P29353 RPL23AP35-201ENST00000451906 501 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RPL18AP17-201ENST00000455326 198 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RPL30P9-201ENST00000465586 330 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RN7SL330P-201ENST00000469709 307 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC084357.1-201ENST00000473404 255 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC005726.1-201ENST00000494679 427 ntBASIC3.23□□□□□ -1.89
SHC1P29353 CBX3P3-201ENST00000508108 532 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC079140.3-201ENST00000511111 550 ntBASIC3.23□□□□□ -1.89
SHC1P29353 NDUFB4P9-201ENST00000511646 388 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RN7SKP13-201ENST00000515933 244 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RNU6-202P-201ENST00000515998 96 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RN7SKP18-201ENST00000516005 275 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RN7SKP96-201ENST00000516948 297 ntBASIC3.23□□□□□ -1.89
SHC1P29353 RANP9-201ENST00000519957 271 ntBASIC3.23□□□□□ -1.89
SHC1P29353 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC1P29353 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC1P29353 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.23□□□□□ -1.89
SHC1P29353 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.23□□□□□ -1.89
SHC1P29353 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.23□□□□□ -1.89
SHC1P29353 AC011602.1-201ENST00000546484 331 ntBASIC3.23□□□□□ -1.89
SHC1P29353 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC1P29353 OR6C7P-201ENST00000547875 934 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.23□□□□□ -1.89
SHC1P29353 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHC1P29353 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.23□□□□□ -1.89
SHC1P29353 AC093519.1-201ENST00000566109 298 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.23□□□□□ -1.89
SHC1P29353 MIR5047-201ENST00000579212 100 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.23□□□□□ -1.89
SHC1P29353 MIR3611-201ENST00000584484 83 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC020914.6-201ENST00000594327 272 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHC1P29353 AC092354.2-201ENST00000607786 514 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AL359535.1-201ENST00000612100 1087 ntBASIC3.23□□□□□ -1.89
SHC1P29353 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHC1P29353 AC073968.1-201ENST00000618594 637 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AL713922.2-201ENST00000619384 716 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AL356266.1-201ENST00000623311 483 ntBASIC3.23□□□□□ -1.89
SHC1P29353 MIR4496-201ENST00000635896 61 ntBASIC3.23□□□□□ -1.89
SHC1P29353 AC009093.8-201ENST00000641769 292 ntBASIC3.23□□□□□ -1.89
SHC1P29353 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHC1P29353 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHC1P29353 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.23□□□□□ -1.89
SHC1P29353 MTND5P24-201ENST00000438892 1767 ntBASIC3.23□□□□□ -1.89
SHC1P29353 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
SHC1P29353 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 CDR1-202ENST00000625883 1485 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.22□□□□□ -1.89
SHC1P29353 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.22□□□□□ -1.89
SHC1P29353 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 AL356473.1-201ENST00000406203 1408 ntBASIC3.22□□□□□ -1.89
SHC1P29353 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 MIR30E-201ENST00000362104 92 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RNU6-433P-201ENST00000363216 104 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RNU6-251P-201ENST00000363235 104 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RNU6-216P-201ENST00000363282 104 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RNU6-115P-201ENST00000364310 107 ntBASIC3.22□□□□□ -1.89
SHC1P29353 Y_RNA.302-201ENST00000364997 102 ntBASIC3.22□□□□□ -1.89
SHC1P29353 Y_RNA.359-201ENST00000365498 102 ntBASIC3.22□□□□□ -1.89
SHC1P29353 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SHC1P29353 TMSB4XP8-201ENST00000402089 135 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RNU6-648P-201ENST00000410190 107 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AF274854.1-201ENST00000413236 615 ntBASIC3.22□□□□□ -1.89
SHC1P29353 TMSB4XP6-201ENST00000415187 135 ntBASIC3.22□□□□□ -1.89
SHC1P29353 MTCO3P1-205ENST00000422088 832 ntBASIC3.22□□□□□ -1.89
SHC1P29353 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.22□□□□□ -1.89
SHC1P29353 TMSB4XP1-201ENST00000424567 135 ntBASIC3.22□□□□□ -1.89
SHC1P29353 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.22□□□□□ -1.89
SHC1P29353 MED14P1-201ENST00000430517 648 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.22□□□□□ -1.89
SHC1P29353 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.22□□□□□ -1.89
SHC1P29353 COX6CP2-201ENST00000444980 225 ntBASIC3.22□□□□□ -1.89
SHC1P29353 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.22□□□□□ -1.89
SHC1P29353 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.22□□□□□ -1.89
SHC1P29353 NDUFA5P7-201ENST00000452914 242 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RPS15AP1-201ENST00000457423 391 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RNU6-956P-201ENST00000458868 103 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 RPL21P129-201ENST00000491732 478 ntBASIC3.22□□□□□ -1.89
SHC1P29353 MTCYBP17-201ENST00000503579 789 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AC110768.1-201ENST00000509222 400 ntBASIC3.22□□□□□ -1.89
SHC1P29353 PTGES3P3-201ENST00000511479 482 ntBASIC3.22□□□□□ -1.89
SHC1P29353 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
SHC1P29353 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.22□□□□□ -1.89
SHC1P29353 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 MTCO1P30-201ENST00000515244 580 ntBASIC3.22□□□□□ -1.89
SHC1P29353 RN7SKP277-201ENST00000516895 283 ntBASIC3.22□□□□□ -1.89
SHC1P29353 PAICSP4-201ENST00000517543 1253 ntBASIC3.22□□□□□ -1.89
SHC1P29353 IGKV2-23-201ENST00000518729 323 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.22□□□□□ -1.89
SHC1P29353 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHC1P29353 OR8L1P-201ENST00000534005 955 ntBASIC3.22□□□□□ -1.89
SHC1P29353 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.22□□□□□ -1.89
SHC1P29353 AC092354.1-201ENST00000606057 376 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms