Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN6P29350 AC017071.1-201ENST00000564407 2204 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN6P29350 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PTPN6P29350 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN6P29350 RNA5SP72-201ENST00000364442 117 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN6P29350 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN6P29350 Y_RNA.408-201ENST00000383987 102 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 MIR183-201ENST00000384958 110 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 MIR34B-201ENST00000385076 84 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PTPN6P29350 SAR1AP2-201ENST00000392696 594 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 FAT1P1-201ENST00000406588 507 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC126124.2-201ENST00000413542 321 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 MTATP6P20-201ENST00000414147 562 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 RPS3AP37-201ENST00000419176 745 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN6P29350 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN6P29350 MTND2P5-201ENST00000432656 1006 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 NANOGP2-201ENST00000435391 727 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 EEF1A1P39-201ENST00000440791 250 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AL589880.1-201ENST00000448271 287 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC005297.2-201ENST00000450430 606 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN6P29350 SUMO2P2-201ENST00000456482 255 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 COX7A2P2-201ENST00000505291 250 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN6P29350 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN6P29350 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.2□□□□□ -1.9
PTPN6P29350 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN6P29350 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN6P29350 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN6P29350 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.2□□□□□ -1.9
PTPN6P29350 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN6P29350 AADACP1-206ENST00000561502 1193 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AL845331.3-202ENST00000562856 261 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
PTPN6P29350 BNIP3P26-201ENST00000600827 554 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 BNIP3P11-201ENST00000603878 563 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC007179.3-201ENST00000604976 235 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC069304.2-201ENST00000605154 435 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC004009.2-201ENST00000623016 728 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC103798.2-201ENST00000624292 632 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC073476.4-201ENST00000628409 72 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 AC127502.3-201ENST00000636170 1206 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 U6.105-201ENST00000637379 88 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PTPN6P29350 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PTPN6P29350 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
PTPN6P29350 AL645937.1-201ENST00000641739 1652 ntBASIC3.2□□□□□ -1.9
PTPN6P29350 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AL136310.1-201ENST00000404926 654 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 RNA5SP107-201ENST00000411358 122 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 RPS15AP38-201ENST00000413110 372 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 UBE2D3P2-201ENST00000424409 445 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN6P29350 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.19□□□□□ -1.9
PTPN6P29350 MUPP-201ENST00000438111 566 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 HMGB3P11-201ENST00000440127 604 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 MTCO2P25-201ENST00000447065 681 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 MTCO3P11-201ENST00000455103 774 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.19□□□□□ -1.9
PTPN6P29350 RPS4XP10-201ENST00000465034 731 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN6P29350 AC093278.1-201ENST00000494700 600 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC090453.1-201ENST00000495560 436 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 TMEM251P1-201ENST00000503717 318 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC114981.1-201ENST00000503897 678 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC008837.2-201ENST00000513076 418 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN6P29350 FABP5P12-201ENST00000515543 389 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN6P29350 AC006518.1-201ENST00000541449 943 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC007458.1-201ENST00000542812 373 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.19□□□□□ -1.9
PTPN6P29350 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN6P29350 RN7SL339P-201ENST00000580597 296 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC091057.3-201ENST00000602684 733 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AC012468.1-201ENST00000604888 430 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.19□□□□□ -1.9
PTPN6P29350 AC009570.1-201ENST00000609599 745 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AL157392.4-201ENST00000609756 345 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 AL356585.4-201ENST00000623078 1229 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.19□□□□□ -1.9
PTPN6P29350 MIR7153-201ENST00000637758 57 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PTPN6P29350 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PTPN6P29350 MTCO1P12-201ENST00000414273 1543 ntBASIC3.19□□□□□ -1.9
PTPN6P29350 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN6P29350 RNA5SP197-201ENST00000363357 119 ntBASIC3.18□□□□□ -1.9
PTPN6P29350 RNU6-560P-201ENST00000364007 108 ntBASIC3.18□□□□□ -1.9
PTPN6P29350 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
PTPN6P29350 SNORA1.3-201ENST00000384676 136 ntBASIC3.18□□□□□ -1.9
PTPN6P29350 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.18□□□□□ -1.9
PTPN6P29350 RNA5SP80-201ENST00000410475 111 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms