Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.95□□□□□ -1.78
BDNFP23560 MIR4444-1-201ENST00000581696 74 ntBASIC3.95□□□□□ -1.78
BDNFP23560 MIR4444-2-201ENST00000584390 74 ntBASIC3.95□□□□□ -1.78
BDNFP23560 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.95□□□□□ -1.78
BDNFP23560 GLUD1P4-201ENST00000590914 418 ntBASIC3.95□□□□□ -1.78
BDNFP23560 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.95□□□□□ -1.78
BDNFP23560 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.95□□□□□ -1.78
BDNFP23560 AL034408.1-202ENST00000636088 415 ntBASIC3.95□□□□□ -1.78
BDNFP23560 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
BDNFP23560 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BDNFP23560 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BDNFP23560 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BDNFP23560 DDX10P1-201ENST00000448545 1933 ntBASIC3.95□□□□□ -1.78
BDNFP23560 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BDNFP23560 AC106754.1-201ENST00000562632 1513 ntBASIC3.95□□□□□ -1.78
BDNFP23560 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
BDNFP23560 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BDNFP23560 AC012321.1-201ENST00000561622 1588 ntBASIC3.94□□□□□ -1.78
BDNFP23560 RNA5SP51-201ENST00000364750 119 ntBASIC3.94□□□□□ -1.78
BDNFP23560 RNA5SP171-201ENST00000391071 115 ntBASIC3.94□□□□□ -1.78
BDNFP23560 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
BDNFP23560 AC018630.2-202ENST00000422992 927 ntBASIC3.94□□□□□ -1.78
BDNFP23560 PPP1R11P2-201ENST00000423543 382 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.94□□□□□ -1.78
BDNFP23560 AC092573.2-201ENST00000434546 243 ntBASIC3.94□□□□□ -1.78
BDNFP23560 RPL35AP22-201ENST00000436855 335 ntBASIC3.94□□□□□ -1.78
BDNFP23560 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BDNFP23560 AC091862.1-201ENST00000438016 1100 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.94□□□□□ -1.78
BDNFP23560 AC112653.1-201ENST00000443851 386 ntBASIC3.94□□□□□ -1.78
BDNFP23560 PTENP1-201ENST00000447117 1215 ntBASIC3.94□□□□□ -1.78
BDNFP23560 VN1R34P-201ENST00000447387 883 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AL031183.1-201ENST00000457667 207 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AC068724.1-201ENST00000487100 792 ntBASIC3.94□□□□□ -1.78
BDNFP23560 TRBV12-2-201ENST00000489763 344 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AP001025.2-201ENST00000490908 477 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.94□□□□□ -1.78
BDNFP23560 SCARNA15.2-201ENST00000516409 127 ntBASIC3.94□□□□□ -1.78
BDNFP23560 RNU6-840P-201ENST00000517275 65 ntBASIC3.94□□□□□ -1.78
BDNFP23560 SUMO2P20-201ENST00000520803 283 ntBASIC3.94□□□□□ -1.78
BDNFP23560 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.94□□□□□ -1.78
BDNFP23560 AC125611.2-201ENST00000551907 647 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AC124947.2-202ENST00000552735 133 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AL132857.1-201ENST00000555180 708 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.94□□□□□ -1.78
BDNFP23560 ZNF415P1-201ENST00000582279 1166 ntBASIC3.94□□□□□ -1.78
BDNFP23560 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.94□□□□□ -1.78
BDNFP23560 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.94□□□□□ -1.78
BDNFP23560 VN1R82P-201ENST00000601481 356 ntBASIC3.94□□□□□ -1.78
BDNFP23560 MTND3P19-201ENST00000603825 345 ntBASIC3.94□□□□□ -1.78
BDNFP23560 HSPE1P7-201ENST00000604681 321 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AL592221.1-201ENST00000605266 382 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.94□□□□□ -1.78
BDNFP23560 U7.8-201ENST00000619968 63 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AC119674.1-207ENST00000641355 633 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AC091564.4-201ENST00000533934 2194 ntBASIC3.94□□□□□ -1.78
BDNFP23560 AC022336.2-201ENST00000568966 2538 ntBASIC3.94□□□□□ -1.78
BDNFP23560 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BDNFP23560 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BDNFP23560 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
BDNFP23560 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BDNFP23560 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BDNFP23560 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BDNFP23560 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BDNFP23560 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BDNFP23560 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 MAPK10-322ENST00000641485 4530 ntBASIC3.93□□□□□ -1.78
BDNFP23560 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BDNFP23560 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
BDNFP23560 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.93□□□□□ -1.78
BDNFP23560 RNU6-906P-201ENST00000384700 70 ntBASIC3.93□□□□□ -1.78
BDNFP23560 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
BDNFP23560 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.93□□□□□ -1.78
BDNFP23560 HLFP1-201ENST00000402375 499 ntBASIC3.93□□□□□ -1.78
BDNFP23560 SYF2P2-201ENST00000417620 583 ntBASIC3.93□□□□□ -1.78
BDNFP23560 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.93□□□□□ -1.78
BDNFP23560 AC007967.1-201ENST00000455422 1159 ntBASIC3.93□□□□□ -1.78
BDNFP23560 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.93□□□□□ -1.78
BDNFP23560 AC112198.1-201ENST00000505369 1220 ntBASIC3.93□□□□□ -1.78
BDNFP23560 AC104619.4-201ENST00000510773 249 ntBASIC3.93□□□□□ -1.78
BDNFP23560 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.93□□□□□ -1.78
BDNFP23560 RNA5SP143-201ENST00000516936 115 ntBASIC3.93□□□□□ -1.78
BDNFP23560 AC026403.1-201ENST00000518938 295 ntBASIC3.93□□□□□ -1.78
BDNFP23560 AL360157.1-201ENST00000565962 87 ntBASIC3.93□□□□□ -1.78
BDNFP23560 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.93□□□□□ -1.78
BDNFP23560 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 RNU6-88P-201ENST00000606801 100 ntBASIC3.93□□□□□ -1.78
BDNFP23560 AC106052.1-201ENST00000608029 497 ntBASIC3.93□□□□□ -1.78
BDNFP23560 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BDNFP23560 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BDNFP23560 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.93□□□□□ -1.78
BDNFP23560 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BDNFP23560 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
BDNFP23560 RNU6-223P-201ENST00000362830 107 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms