Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4□□□□□ -1.77
TNFSF4P23510 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFSF4P23510 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
TNFSF4P23510 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFSF4P23510 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4□□□□□ -1.77
TNFSF4P23510 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4□□□□□ -1.77
TNFSF4P23510 AL590762.2-201ENST00000395798 571 ntBASIC4□□□□□ -1.77
TNFSF4P23510 LAP3P1-201ENST00000403648 294 ntBASIC4□□□□□ -1.77
TNFSF4P23510 RPS4XP9-201ENST00000405151 780 ntBASIC4□□□□□ -1.77
TNFSF4P23510 GSTA9P-201ENST00000406231 611 ntBASIC4□□□□□ -1.77
TNFSF4P23510 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4□□□□□ -1.77
TNFSF4P23510 RSU1P3-201ENST00000412878 835 ntBASIC4□□□□□ -1.77
TNFSF4P23510 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4□□□□□ -1.77
TNFSF4P23510 CKS1BP6-201ENST00000424932 240 ntBASIC4□□□□□ -1.77
TNFSF4P23510 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFSF4P23510 AC006480.1-201ENST00000449887 378 ntBASIC4□□□□□ -1.77
TNFSF4P23510 CYCSP34-201ENST00000458172 304 ntBASIC4□□□□□ -1.77
TNFSF4P23510 AL049874.1-201ENST00000489560 388 ntBASIC4□□□□□ -1.77
TNFSF4P23510 AC107401.1-201ENST00000503426 685 ntBASIC4□□□□□ -1.77
TNFSF4P23510 AC108078.1-201ENST00000508073 725 ntBASIC4□□□□□ -1.77
TNFSF4P23510 SCARNA15.2-201ENST00000516409 127 ntBASIC4□□□□□ -1.77
TNFSF4P23510 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4□□□□□ -1.77
TNFSF4P23510 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4□□□□□ -1.77
TNFSF4P23510 ARL2BPP2-201ENST00000550907 489 ntBASIC4□□□□□ -1.77
TNFSF4P23510 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4□□□□□ -1.77
TNFSF4P23510 AC068790.6-201ENST00000602558 258 ntBASIC4□□□□□ -1.77
TNFSF4P23510 AL022154.1-201ENST00000604698 785 ntBASIC4□□□□□ -1.77
TNFSF4P23510 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4□□□□□ -1.77
TNFSF4P23510 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4□□□□□ -1.77
TNFSF4P23510 uc_338.32-201ENST00000615087 172 ntBASIC4□□□□□ -1.77
TNFSF4P23510 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4□□□□□ -1.77
TNFSF4P23510 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4□□□□□ -1.77
TNFSF4P23510 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFSF4P23510 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFSF4P23510 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4□□□□□ -1.77
TNFSF4P23510 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TNFSF4P23510 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
TNFSF4P23510 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TNFSF4P23510 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4□□□□□ -1.77
TNFSF4P23510 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4□□□□□ -1.77
TNFSF4P23510 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFSF4P23510 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
TNFSF4P23510 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFSF4P23510 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TNFSF4P23510 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFSF4P23510 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFSF4P23510 OR5J1P-201ENST00000313544 939 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AL590240.1-201ENST00000334118 313 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
TNFSF4P23510 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TNFSF4P23510 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFSF4P23510 RNU6-169P-201ENST00000365336 107 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 Y_RNA.505-201ENST00000384489 102 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 RNU6-192P-201ENST00000391253 100 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 RPS16P5-201ENST00000406501 404 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AC140479.3-201ENST00000418944 1126 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 NDUFB4P7-201ENST00000423198 363 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AC104651.1-201ENST00000427559 735 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AL590383.1-201ENST00000428602 75 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFSF4P23510 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.99□□□□□ -1.77
TNFSF4P23510 DNAJC19P4-201ENST00000440115 345 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFSF4P23510 MTND1P1-201ENST00000445453 368 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AC079781.2-201ENST00000446424 169 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AC020550.1-201ENST00000447385 163 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 GAPDHP27-201ENST00000447427 1020 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.99□□□□□ -1.77
TNFSF4P23510 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.99□□□□□ -1.77
TNFSF4P23510 AC133473.1-201ENST00000455173 299 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 RN7SL432P-201ENST00000484057 298 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
TNFSF4P23510 HMGB1P29-201ENST00000505659 499 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFSF4P23510 ARL2BPP6-201ENST00000512757 439 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 OR7H2P-201ENST00000513483 306 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFSF4P23510 RNU1-61P-201ENST00000516107 151 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 CDH12P4-201ENST00000517835 295 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 CDH12P3-201ENST00000517935 295 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 CDH12P1-201ENST00000518435 295 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.99□□□□□ -1.77
TNFSF4P23510 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.99□□□□□ -1.77
TNFSF4P23510 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFSF4P23510 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFSF4P23510 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.99□□□□□ -1.77
TNFSF4P23510 CBX3P5-201ENST00000552017 521 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.99□□□□□ -1.77
TNFSF4P23510 AC006960.3-201ENST00000561845 705 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AC022968.1-201ENST00000567372 442 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 AC005951.2-201ENST00000576282 495 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFSF4P23510 AC023043.4-201ENST00000612081 449 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFSF4P23510 OR5AK4P-201ENST00000635912 903 ntBASIC3.99□□□□□ -1.77
TNFSF4P23510 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.99□□□□□ -1.77
TNFSF4P23510 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.99□□□□□ -1.77
TNFSF4P23510 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TNFSF4P23510 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms