Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
USF1P22415 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.66□□□□□ -1.98
USF1P22415 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.66□□□□□ -1.98
USF1P22415 AC007536.1-201ENST00000533382 349 ntBASIC2.66□□□□□ -1.98
USF1P22415 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.66□□□□□ -1.98
USF1P22415 AL136520.1-202ENST00000555494 763 ntBASIC2.66□□□□□ -1.98
USF1P22415 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.66□□□□□ -1.98
USF1P22415 AC010653.1-201ENST00000571108 881 ntBASIC2.66□□□□□ -1.98
USF1P22415 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.66□□□□□ -1.98
USF1P22415 AC090666.1-201ENST00000578241 445 ntBASIC2.66□□□□□ -1.98
USF1P22415 FAM60BP-201ENST00000578364 658 ntBASIC2.66□□□□□ -1.98
USF1P22415 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.66□□□□□ -1.98
USF1P22415 AC008962.1-201ENST00000605729 304 ntBASIC2.66□□□□□ -1.98
USF1P22415 CYP3A51P-201ENST00000633513 256 ntBASIC2.66□□□□□ -1.98
USF1P22415 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.66□□□□□ -1.98
USF1P22415 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
USF1P22415 MFSD8-245ENST00000641743 948 ntBASIC2.66□□□□□ -1.98
USF1P22415 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
USF1P22415 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.66□□□□□ -1.98
USF1P22415 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
USF1P22415 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
USF1P22415 MTCO1P23-201ENST00000415223 1526 ntBASIC2.65□□□□□ -1.99
USF1P22415 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USF1P22415 HMGB1P5-201ENST00000255320 642 ntBASIC2.65□□□□□ -1.99
USF1P22415 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USF1P22415 RNU1-70P-201ENST00000362618 164 ntBASIC2.65□□□□□ -1.99
USF1P22415 RNU6-1066P-201ENST00000363573 105 ntBASIC2.65□□□□□ -1.99
USF1P22415 SNORA5B-201ENST00000363786 132 ntBASIC2.65□□□□□ -1.99
USF1P22415 AC016769.3-201ENST00000396562 315 ntBASIC2.65□□□□□ -1.99
USF1P22415 ARF4P3-201ENST00000397387 509 ntBASIC2.65□□□□□ -1.99
USF1P22415 MIR1289-1-201ENST00000408836 144 ntBASIC2.65□□□□□ -1.99
USF1P22415 RN7SKP123-201ENST00000410732 291 ntBASIC2.65□□□□□ -1.99
USF1P22415 RNU2-72P-201ENST00000411175 163 ntBASIC2.65□□□□□ -1.99
USF1P22415 USP9YP19-201ENST00000412165 485 ntBASIC2.65□□□□□ -1.99
USF1P22415 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.65□□□□□ -1.99
USF1P22415 AC092634.6-201ENST00000418558 192 ntBASIC2.65□□□□□ -1.99
USF1P22415 AC027644.1-201ENST00000419595 298 ntBASIC2.65□□□□□ -1.99
USF1P22415 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.65□□□□□ -1.99
USF1P22415 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
USF1P22415 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.65□□□□□ -1.99
USF1P22415 AC025750.2-201ENST00000442609 450 ntBASIC2.65□□□□□ -1.99
USF1P22415 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.65□□□□□ -1.99
USF1P22415 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.65□□□□□ -1.99
USF1P22415 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.65□□□□□ -1.99
USF1P22415 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.65□□□□□ -1.99
USF1P22415 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.65□□□□□ -1.99
USF1P22415 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.65□□□□□ -1.99
USF1P22415 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.65□□□□□ -1.99
USF1P22415 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.65□□□□□ -1.99
USF1P22415 AC008885.1-201ENST00000514930 301 ntBASIC2.65□□□□□ -1.99
USF1P22415 RNU5A-7P-201ENST00000515979 116 ntBASIC2.65□□□□□ -1.99
USF1P22415 RNU6-1095P-201ENST00000516148 108 ntBASIC2.65□□□□□ -1.99
USF1P22415 SNORA48.10-201ENST00000516965 160 ntBASIC2.65□□□□□ -1.99
USF1P22415 RN7SKP272-201ENST00000516988 232 ntBASIC2.65□□□□□ -1.99
USF1P22415 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
USF1P22415 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
USF1P22415 ERHP1-201ENST00000523006 310 ntBASIC2.65□□□□□ -1.99
USF1P22415 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.65□□□□□ -1.99
USF1P22415 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.65□□□□□ -1.99
USF1P22415 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.65□□□□□ -1.99
USF1P22415 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.65□□□□□ -1.99
USF1P22415 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
USF1P22415 MIR2682-201ENST00000580305 110 ntBASIC2.65□□□□□ -1.99
USF1P22415 UBL5P2-201ENST00000583788 219 ntBASIC2.65□□□□□ -1.99
USF1P22415 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.65□□□□□ -1.99
USF1P22415 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.65□□□□□ -1.99
USF1P22415 AC231759.1-201ENST00000616455 597 ntBASIC2.65□□□□□ -1.99
USF1P22415 ATP5A1P2-202ENST00000616464 443 ntBASIC2.65□□□□□ -1.99
USF1P22415 AC002076.2-201ENST00000617362 122 ntBASIC2.65□□□□□ -1.99
USF1P22415 MIR622-201ENST00000638396 96 ntBASIC2.65□□□□□ -1.99
USF1P22415 AC139713.2-210ENST00000641741 992 ntBASIC2.65□□□□□ -1.99
USF1P22415 AC000403.1-201ENST00000613696 3585 ntBASIC2.65□□□□□ -1.99
USF1P22415 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.65□□□□□ -1.99
USF1P22415 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USF1P22415 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USF1P22415 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
USF1P22415 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USF1P22415 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
USF1P22415 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
USF1P22415 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.64□□□□□ -1.99
USF1P22415 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
USF1P22415 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
USF1P22415 RNU6-492P-201ENST00000363035 104 ntBASIC2.64□□□□□ -1.99
USF1P22415 Y_RNA.110-201ENST00000363220 99 ntBASIC2.64□□□□□ -1.99
USF1P22415 SNORA71.1-201ENST00000364523 117 ntBASIC2.64□□□□□ -1.99
USF1P22415 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.64□□□□□ -1.99
USF1P22415 SNORD51-201ENST00000384320 80 ntBASIC2.64□□□□□ -1.99
USF1P22415 SNORD15B-201ENST00000384714 146 ntBASIC2.64□□□□□ -1.99
USF1P22415 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
USF1P22415 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.64□□□□□ -1.99
USF1P22415 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.64□□□□□ -1.99
USF1P22415 MTCO3P1-205ENST00000422088 832 ntBASIC2.64□□□□□ -1.99
USF1P22415 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.64□□□□□ -1.99
USF1P22415 MTCO1P39-201ENST00000426148 480 ntBASIC2.64□□□□□ -1.99
USF1P22415 RAC1P8-201ENST00000427086 527 ntBASIC2.64□□□□□ -1.99
USF1P22415 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.64□□□□□ -1.99
USF1P22415 UBE2V1P6-201ENST00000430840 422 ntBASIC2.64□□□□□ -1.99
USF1P22415 AC107083.1-201ENST00000439643 279 ntBASIC2.64□□□□□ -1.99
USF1P22415 AL645638.1-201ENST00000440519 361 ntBASIC2.64□□□□□ -1.99
USF1P22415 AL590639.1-201ENST00000456484 337 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms