Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.64□□□□□ -1.51
LMNB1P20700 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.64□□□□□ -1.51
LMNB1P20700 AC068993.1-201ENST00000546724 589 ntBASIC5.64□□□□□ -1.51
LMNB1P20700 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.64□□□□□ -1.51
LMNB1P20700 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.64□□□□□ -1.51
LMNB1P20700 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.64□□□□□ -1.51
LMNB1P20700 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.64□□□□□ -1.51
LMNB1P20700 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.64□□□□□ -1.51
LMNB1P20700 AC010928.3-201ENST00000587712 541 ntBASIC5.64□□□□□ -1.51
LMNB1P20700 AL596245.1-201ENST00000618994 362 ntBASIC5.64□□□□□ -1.51
LMNB1P20700 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.64□□□□□ -1.51
LMNB1P20700 AC105074.1-201ENST00000623380 3095 ntBASIC5.64□□□□□ -1.51
LMNB1P20700 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LMNB1P20700 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.64□□□□□ -1.51
LMNB1P20700 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LMNB1P20700 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
LMNB1P20700 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LMNB1P20700 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.64□□□□□ -1.51
LMNB1P20700 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LMNB1P20700 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
LMNB1P20700 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LMNB1P20700 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
LMNB1P20700 Z95331.1-201ENST00000623075 23112 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMNB1P20700 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.63□□□□□ -1.51
LMNB1P20700 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.63□□□□□ -1.51
LMNB1P20700 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMNB1P20700 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.63□□□□□ -1.51
LMNB1P20700 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMNB1P20700 MIR372-201ENST00000362225 67 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 MIR383-201ENST00000362257 73 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 RNA5SP258-201ENST00000362750 119 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 Y_RNA.333-201ENST00000365274 102 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 SNORD82-201ENST00000365530 70 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 RNA5SP283-201ENST00000365604 119 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.63□□□□□ -1.51
LMNB1P20700 RNA5SP372-201ENST00000390836 115 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 SSXP10-201ENST00000402595 565 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AL136116.1-201ENST00000403591 381 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 RNU6-373P-201ENST00000411247 98 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.63□□□□□ -1.51
LMNB1P20700 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 AL590609.2-201ENST00000421430 368 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 RPL23AP83-201ENST00000434984 473 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 FTH1P1-201ENST00000437933 532 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.63□□□□□ -1.51
LMNB1P20700 RPL7AP61-201ENST00000443410 636 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 CYCSP24-201ENST00000445119 316 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.63□□□□□ -1.51
LMNB1P20700 NANOGP10-201ENST00000453325 895 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AC233279.1-201ENST00000455300 423 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 RNU7-63P-201ENST00000459054 62 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 SCARNA10-201ENST00000459255 330 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.63□□□□□ -1.51
LMNB1P20700 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.63□□□□□ -1.51
LMNB1P20700 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.63□□□□□ -1.51
LMNB1P20700 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.63□□□□□ -1.51
LMNB1P20700 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.63□□□□□ -1.51
LMNB1P20700 AL355375.2-201ENST00000574825 175 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.63□□□□□ -1.51
LMNB1P20700 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.63□□□□□ -1.51
LMNB1P20700 AC116447.1-201ENST00000613153 453 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AC009248.2-201ENST00000619826 254 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 AL159972.1-201ENST00000625150 448 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LMNB1P20700 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LMNB1P20700 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LMNB1P20700 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
LMNB1P20700 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.63□□□□□ -1.51
LMNB1P20700 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LMNB1P20700 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LMNB1P20700 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LMNB1P20700 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
LMNB1P20700 AC073136.1-201ENST00000449426 2884 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 AC009229.4-201ENST00000623854 1947 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LMNB1P20700 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LMNB1P20700 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMNB1P20700 NACAP2-201ENST00000318548 624 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 SNORA71.3-201ENST00000362582 128 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 RNU6-97P-201ENST00000363387 104 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 RNU6-525P-201ENST00000363685 104 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 SNORD46.1-201ENST00000364139 104 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 RNY1P12-201ENST00000364251 105 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 RNU1-132P-201ENST00000364300 164 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMNB1P20700 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LMNB1P20700 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMNB1P20700 RNU6-39P-201ENST00000384344 107 ntBASIC5.62□□□□□ -1.51
LMNB1P20700 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.62□□□□□ -1.51
LMNB1P20700 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.62□□□□□ -1.51
LMNB1P20700 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms