Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN1P18031 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 OR1S2-201ENST00000302592 978 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 RNU5A-8P-201ENST00000364102 114 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 RNVU1-3-201ENST00000364313 161 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 RNY3P13-201ENST00000365542 102 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 RNU6-74P-201ENST00000384235 107 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 ENSAP1-201ENST00000392855 326 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN1P18031 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN1P18031 AL356387.2-201ENST00000422272 243 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AL732292.1-201ENST00000426692 226 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 RPL36AP53-201ENST00000432891 316 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 FTH1P1-201ENST00000437933 532 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AC012671.1-201ENST00000451912 203 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 NANOGP10-201ENST00000453325 895 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 CACYBPP2-201ENST00000453625 678 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN1P18031 CYCSP34-201ENST00000458172 304 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN1P18031 RPS3AP50-201ENST00000487064 803 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 HMGB1P21-201ENST00000502313 581 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN1P18031 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN1P18031 OR4P1P-201ENST00000530808 1136 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN1P18031 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.79□□□□□ -1.64
PTPN1P18031 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN1P18031 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN1P18031 AC011477.5-201ENST00000586571 259 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AC105224.1-201ENST00000587055 421 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 RNF138P2-201ENST00000603490 592 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AC233309.1-201ENST00000619522 751 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.79□□□□□ -1.64
PTPN1P18031 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 AC100810.6-201ENST00000638068 285 ntBASIC4.79□□□□□ -1.64
PTPN1P18031 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PTPN1P18031 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN1P18031 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN1P18031 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.79□□□□□ -1.64
PTPN1P18031 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN1P18031 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.79□□□□□ -1.64
PTPN1P18031 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN1P18031 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PTPN1P18031 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN1P18031 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN1P18031 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN1P18031 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN1P18031 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN1P18031 OR51H2P-202ENST00000641424 3046 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN1P18031 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PTPN1P18031 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PTPN1P18031 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN1P18031 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
PTPN1P18031 NACAP2-201ENST00000318548 624 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 RPL7P26-201ENST00000333817 754 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 Y_RNA.166-201ENST00000363730 102 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 RNU6-146P-201ENST00000384602 108 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 Y_RNA.548-201ENST00000384656 105 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 PDCL2P1-201ENST00000419302 352 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN1P18031 Z74021.1-201ENST00000423610 407 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN1P18031 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN1P18031 AL353597.2-202ENST00000434901 373 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN1P18031 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN1P18031 DDX3P2-201ENST00000446138 111 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN1P18031 AL353691.1-201ENST00000451332 387 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AL356010.1-201ENST00000456364 102 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AC078785.3-201ENST00000476607 425 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AC093278.1-201ENST00000494700 600 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AL139099.1-201ENST00000497398 403 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 COX7A2P2-201ENST00000505291 250 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 FGF7P4-201ENST00000509595 295 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 FTH1P21-201ENST00000512179 511 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN1P18031 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN1P18031 OR5B19P-201ENST00000531766 928 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN1P18031 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.78□□□□□ -1.64
PTPN1P18031 AC243972.3-201ENST00000539655 198 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
PTPN1P18031 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.78□□□□□ -1.64
PTPN1P18031 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN1P18031 MIR4795-201ENST00000584182 89 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AC091178.1-203ENST00000584586 279 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.78□□□□□ -1.64
PTPN1P18031 GLUD1P4-201ENST00000590914 418 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 BPIFA4P-203ENST00000603168 689 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AL356218.2-201ENST00000605264 187 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AC113194.1-201ENST00000606037 500 ntBASIC4.78□□□□□ -1.64
PTPN1P18031 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.78□□□□□ -1.64
PTPN1P18031 SNORD91B-202ENST00000608459 222 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms