Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SNRPA1P09661 Y_RNA.333-201ENST00000365274 102 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 MIR183-201ENST00000384958 110 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 SNORD115-47-201ENST00000391226 86 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 SNORA11.1-201ENST00000408133 129 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 BTF3P5-201ENST00000457252 467 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AL121769.1-201ENST00000469473 401 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 RPS3AP17-201ENST00000472594 777 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC106872.3-201ENST00000495104 446 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 SNORA18.6-201ENST00000516792 115 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.81□□□□□ -1.64
SNRPA1P09661 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC006960.3-201ENST00000561845 705 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AP005205.1-201ENST00000563503 508 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC068135.2-201ENST00000569293 1028 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 LARP7P2-201ENST00000575306 125 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AP001180.3-201ENST00000582221 145 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AL161729.4-201ENST00000604650 476 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AC012468.1-201ENST00000604888 430 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AP000860.1-201ENST00000605250 559 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 U3.45-201ENST00000607547 219 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC119674.1-207ENST00000641355 633 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
SNRPA1P09661 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SNRPA1P09661 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.81□□□□□ -1.64
SNRPA1P09661 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
SNRPA1P09661 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SNRPA1P09661 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.81□□□□□ -1.64
SNRPA1P09661 AC000123.3-201ENST00000624029 4975 ntBASIC4.81□□□□□ -1.64
SNRPA1P09661 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.8□□□□□ -1.64
SNRPA1P09661 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SNRPA1P09661 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNRPA1P09661 RNU4-12P-201ENST00000365233 139 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNRPA1P09661 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SNRPA1P09661 DHFRP6-201ENST00000401776 268 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 RPL31P52-201ENST00000407532 367 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.8□□□□□ -1.64
SNRPA1P09661 AL513174.1-201ENST00000423182 629 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 USP9YP18-201ENST00000425912 695 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.8□□□□□ -1.64
SNRPA1P09661 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.8□□□□□ -1.64
SNRPA1P09661 AC011742.1-201ENST00000431448 434 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.8□□□□□ -1.64
SNRPA1P09661 MTND3P21-201ENST00000433774 331 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 PRDX3P3-201ENST00000447765 522 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 OR6K1P-201ENST00000456766 971 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.8□□□□□ -1.64
SNRPA1P09661 RN7SL293P-201ENST00000481765 281 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.8□□□□□ -1.64
SNRPA1P09661 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNRPA1P09661 AC091133.4-201ENST00000511142 308 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AC026726.1-201ENST00000512859 601 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 RNU6-430P-201ENST00000517078 107 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.8□□□□□ -1.64
SNRPA1P09661 AC022878.1-201ENST00000530684 149 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.8□□□□□ -1.64
SNRPA1P09661 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.8□□□□□ -1.64
SNRPA1P09661 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.8□□□□□ -1.64
SNRPA1P09661 AC009977.1-201ENST00000586015 570 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.8□□□□□ -1.64
SNRPA1P09661 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNRPA1P09661 SRGNP1-201ENST00000603392 451 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AL137849.1-201ENST00000604767 169 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AC090578.1-201ENST00000604955 591 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AP001506.1-201ENST00000615444 211 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AC007014.2-201ENST00000615581 479 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AC108479.2-201ENST00000617314 601 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AL158209.2-201ENST00000619266 216 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.8□□□□□ -1.64
SNRPA1P09661 AL357559.1-201ENST00000622228 274 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 AL008636.1-201ENST00000625038 1018 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 U6.105-201ENST00000637379 88 ntBASIC4.8□□□□□ -1.64
SNRPA1P09661 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNRPA1P09661 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
SNRPA1P09661 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.8□□□□□ -1.64
SNRPA1P09661 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SNRPA1P09661 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SNRPA1P09661 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SNRPA1P09661 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.79□□□□□ -1.64
SNRPA1P09661 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNRPA1P09661 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SNRPA1P09661 Y_RNA.88-201ENST00000363029 99 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 RNU6-441P-201ENST00000384545 106 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 RAP1BP3-201ENST00000407180 549 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 RPS3AP3-201ENST00000411933 242 ntBASIC4.79□□□□□ -1.64
SNRPA1P09661 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.79□□□□□ -1.64
SNRPA1P09661 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms