Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AP001033.2-201ENST00000609701 1003 ntBASIC2.96□□□□□ -1.94
TPM1P09493 AP006248.3-201ENST00000623580 594 ntBASIC2.96□□□□□ -1.94
TPM1P09493 AC110079.1-202ENST00000635213 138 ntBASIC2.96□□□□□ -1.94
TPM1P09493 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
TPM1P09493 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
TPM1P09493 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
TPM1P09493 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.95□□□□□ -1.94
TPM1P09493 AL672167.1-206ENST00000356293 943 ntBASIC2.95□□□□□ -1.94
TPM1P09493 Y_RNA.126-201ENST00000363382 111 ntBASIC2.95□□□□□ -1.94
TPM1P09493 SNORD82-201ENST00000365530 70 ntBASIC2.95□□□□□ -1.94
TPM1P09493 RNU6-1005P-201ENST00000384519 107 ntBASIC2.95□□□□□ -1.94
TPM1P09493 U3.29-201ENST00000391296 212 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AL138885.1-201ENST00000405921 675 ntBASIC2.95□□□□□ -1.94
TPM1P09493 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.95□□□□□ -1.94
TPM1P09493 AL356320.2-201ENST00000417263 507 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.95□□□□□ -1.94
TPM1P09493 EZH2P1-201ENST00000431167 291 ntBASIC2.95□□□□□ -1.94
TPM1P09493 CR769767.1-201ENST00000436337 346 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC093156.1-201ENST00000440382 670 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC112653.1-201ENST00000443851 386 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.95□□□□□ -1.94
TPM1P09493 MTND2P6-201ENST00000455337 1030 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AP000852.1-201ENST00000472460 573 ntBASIC2.95□□□□□ -1.94
TPM1P09493 KC877373.1-201ENST00000479066 408 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.95□□□□□ -1.94
TPM1P09493 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.95□□□□□ -1.94
TPM1P09493 AC006445.2-201ENST00000510061 472 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC092593.2-201ENST00000513866 913 ntBASIC2.95□□□□□ -1.94
TPM1P09493 IGJP1-201ENST00000522682 475 ntBASIC2.95□□□□□ -1.94
TPM1P09493 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.95□□□□□ -1.94
TPM1P09493 AC095057.3-201ENST00000567102 1157 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.95□□□□□ -1.94
TPM1P09493 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.95□□□□□ -1.94
TPM1P09493 MIR3158-1-201ENST00000583596 81 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC008739.3-201ENST00000603262 127 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AL137843.1-201ENST00000605078 385 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC112503.2-201ENST00000609005 552 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC096586.1-201ENST00000610267 561 ntBASIC2.95□□□□□ -1.94
TPM1P09493 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.95□□□□□ -1.94
TPM1P09493 AC009318.4-201ENST00000620496 486 ntBASIC2.95□□□□□ -1.94
TPM1P09493 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TPM1P09493 ZNF519P1-201ENST00000449011 1626 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AC087359.1-201ENST00000508335 1740 ntBASIC2.94□□□□□ -1.94
TPM1P09493 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
TPM1P09493 RNU1-138P-201ENST00000384093 164 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.94□□□□□ -1.94
TPM1P09493 RPL7P37-201ENST00000425095 738 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.94□□□□□ -1.94
TPM1P09493 AL009174.1-201ENST00000426577 416 ntBASIC2.94□□□□□ -1.94
TPM1P09493 ARL4AP4-201ENST00000434170 518 ntBASIC2.94□□□□□ -1.94
TPM1P09493 MTND4LP10-201ENST00000435146 291 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AC004866.2-201ENST00000438285 481 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AL109741.2-201ENST00000455561 343 ntBASIC2.94□□□□□ -1.94
TPM1P09493 snoU109.4-201ENST00000458953 143 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.94□□□□□ -1.94
TPM1P09493 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.94□□□□□ -1.94
TPM1P09493 SNORA70.16-201ENST00000516390 95 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.94□□□□□ -1.94
TPM1P09493 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.94□□□□□ -1.94
TPM1P09493 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.94□□□□□ -1.94
TPM1P09493 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AC104237.2-201ENST00000612456 443 ntBASIC2.94□□□□□ -1.94
TPM1P09493 AC012314.7-201ENST00000619693 93 ntBASIC2.94□□□□□ -1.94
TPM1P09493 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.94□□□□□ -1.94
TPM1P09493 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC2.94□□□□□ -1.94
TPM1P09493 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TPM1P09493 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.93□□□□□ -1.94
TPM1P09493 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TPM1P09493 MIR422A-201ENST00000362286 90 ntBASIC2.93□□□□□ -1.94
TPM1P09493 RNA5SP393-201ENST00000363423 117 ntBASIC2.93□□□□□ -1.94
TPM1P09493 RNU1-100P-201ENST00000365255 165 ntBASIC2.93□□□□□ -1.94
TPM1P09493 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.93□□□□□ -1.94
TPM1P09493 AL023807.1-201ENST00000407932 359 ntBASIC2.93□□□□□ -1.94
TPM1P09493 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.93□□□□□ -1.94
TPM1P09493 AC012497.1-201ENST00000429392 575 ntBASIC2.93□□□□□ -1.94
TPM1P09493 NDUFB4P6-201ENST00000436819 366 ntBASIC2.93□□□□□ -1.94
TPM1P09493 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.93□□□□□ -1.94
TPM1P09493 AL589880.1-201ENST00000448271 287 ntBASIC2.93□□□□□ -1.94
TPM1P09493 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.93□□□□□ -1.94
TPM1P09493 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.93□□□□□ -1.94
TPM1P09493 RPS27P27-201ENST00000498779 255 ntBASIC2.93□□□□□ -1.94
TPM1P09493 RNU6-1095P-201ENST00000516148 108 ntBASIC2.93□□□□□ -1.94
TPM1P09493 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.93□□□□□ -1.94
TPM1P09493 AC087272.1-201ENST00000523624 533 ntBASIC2.93□□□□□ -1.94
TPM1P09493 MTCO1P47-201ENST00000523889 1271 ntBASIC2.93□□□□□ -1.94
TPM1P09493 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.93□□□□□ -1.94
TPM1P09493 AC233266.2-201ENST00000567067 528 ntBASIC2.93□□□□□ -1.94
TPM1P09493 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.93□□□□□ -1.94
TPM1P09493 AC010738.1-201ENST00000604970 987 ntBASIC2.93□□□□□ -1.94
TPM1P09493 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.93□□□□□ -1.94
TPM1P09493 AC006133.1-201ENST00000617106 264 ntBASIC2.93□□□□□ -1.94
TPM1P09493 NUP58P1-201ENST00000502546 1738 ntBASIC2.93□□□□□ -1.94
TPM1P09493 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TPM1P09493 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
TPM1P09493 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TPM1P09493 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TPM1P09493 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TPM1P09493 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TPM1P09493 NACA3P-201ENST00000359690 648 ntBASIC2.92□□□□□ -1.94
TPM1P09493 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms