Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC115085.1-201ENST00000588924 229 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A2P08572 VN1R7P-201ENST00000619242 903 ntBASIC2.25□□□□□ -2.05
COL4A2P08572 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A2P08572 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A2P08572 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A2P08572 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A2P08572 MIR21-201ENST00000362134 72 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 MIR221-201ENST00000385135 110 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 XKRY2-201ENST00000442362 1093 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.24□□□□□ -2.05
COL4A2P08572 ARL5AP2-201ENST00000444698 533 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.24□□□□□ -2.05
COL4A2P08572 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A2P08572 CFTRP1-201ENST00000456646 183 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A2P08572 OR5H4P-201ENST00000510851 923 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A2P08572 AC025918.2-201ENST00000558683 763 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 AC090751.1-201ENST00000566966 267 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 AC105137.2-201ENST00000569073 466 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A2P08572 AC018618.2-201ENST00000604770 446 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
COL4A2P08572 AL118508.4-201ENST00000624142 1176 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A2P08572 MTCO1P9-201ENST00000505577 1534 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 AL139811.1-201ENST00000424779 2299 ntBASIC2.24□□□□□ -2.05
COL4A2P08572 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
COL4A2P08572 DCAF13P1-201ENST00000495256 1330 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A2P08572 METTL21EP-201ENST00000298105 713 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A2P08572 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
COL4A2P08572 OR5H15-201ENST00000383696 930 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 TAF9BP2-201ENST00000400856 499 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.23□□□□□ -2.05
COL4A2P08572 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.23□□□□□ -2.05
COL4A2P08572 MORF4L1P6-201ENST00000418771 268 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 MTND4P24-201ENST00000424002 397 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 TRIM60P13-201ENST00000432350 1283 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.23□□□□□ -2.05
COL4A2P08572 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.23□□□□□ -2.05
COL4A2P08572 TPTE2P6-202ENST00000445572 1007 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 MTND5P8-201ENST00000449817 1083 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.23□□□□□ -2.05
COL4A2P08572 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.23□□□□□ -2.05
COL4A2P08572 CIR1P1-201ENST00000524055 1133 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.23□□□□□ -2.05
COL4A2P08572 AC010198.2-201ENST00000550612 259 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 AADACP1-206ENST00000561502 1193 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 AC012182.1-201ENST00000570133 895 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.23□□□□□ -2.05
COL4A2P08572 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.23□□□□□ -2.05
COL4A2P08572 AC069304.3-201ENST00000603938 1084 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 AC010378.1-201ENST00000619270 362 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 MIR219B-201ENST00000637023 88 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A2P08572 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A2P08572 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.23□□□□□ -2.05
COL4A2P08572 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A2P08572 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.23□□□□□ -2.05
COL4A2P08572 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A2P08572 AL512283.1-201ENST00000606756 1384 ntBASIC2.23□□□□□ -2.05
COL4A2P08572 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.23□□□□□ -2.05
COL4A2P08572 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
COL4A2P08572 AL512646.1-201ENST00000269395 1077 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A2P08572 AL161781.1-201ENST00000354277 403 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 RNU6-883P-201ENST00000384597 107 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC010385.1-201ENST00000412374 256 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC073310.1-201ENST00000423226 1033 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A2P08572 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A2P08572 AC091179.1-201ENST00000461606 579 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 RPS27AP9-201ENST00000477681 438 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A2P08572 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A2P08572 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A2P08572 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A2P08572 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.22□□□□□ -2.05
COL4A2P08572 MTCYBP28-201ENST00000566728 1132 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A2P08572 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.22□□□□□ -2.05
COL4A2P08572 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.22□□□□□ -2.05
COL4A2P08572 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A2P08572 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A2P08572 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COL4A2P08572 AC091564.4-201ENST00000533934 2194 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 AC009487.2-201ENST00000420969 6821 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
COL4A2P08572 MIR1303-201ENST00000408625 86 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.22□□□□□ -2.05
COL4A2P08572 CR848007.2-201ENST00000424918 787 ntBASIC2.22□□□□□ -2.05
COL4A2P08572 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms