Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.55□□□□□ -2
CD74P04233 RPL7P25-201ENST00000404151 721 ntBASIC2.55□□□□□ -2
CD74P04233 RAP1BP1-201ENST00000412709 553 ntBASIC2.55□□□□□ -2
CD74P04233 FCF1P2-201ENST00000415284 583 ntBASIC2.55□□□□□ -2
CD74P04233 AC245052.5-201ENST00000416320 649 ntBASIC2.55□□□□□ -2
CD74P04233 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.55□□□□□ -2
CD74P04233 AC092634.2-201ENST00000428146 1010 ntBASIC2.55□□□□□ -2
CD74P04233 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.55□□□□□ -2
CD74P04233 AC011242.1-201ENST00000433596 1158 ntBASIC2.55□□□□□ -2
CD74P04233 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.55□□□□□ -2
CD74P04233 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.55□□□□□ -2
CD74P04233 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.55□□□□□ -2
CD74P04233 AL590664.1-201ENST00000448065 339 ntBASIC2.55□□□□□ -2
CD74P04233 COX6CP18-201ENST00000448769 222 ntBASIC2.55□□□□□ -2
CD74P04233 RPL26P28-201ENST00000451325 435 ntBASIC2.55□□□□□ -2
CD74P04233 RPS29P12-201ENST00000460178 152 ntBASIC2.55□□□□□ -2
CD74P04233 RN7SL293P-201ENST00000481765 281 ntBASIC2.55□□□□□ -2
CD74P04233 RPL30P14-201ENST00000482744 348 ntBASIC2.55□□□□□ -2
CD74P04233 RPL9P33-201ENST00000484311 566 ntBASIC2.55□□□□□ -2
CD74P04233 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.55□□□□□ -2
CD74P04233 WBP1LP4-201ENST00000505043 344 ntBASIC2.55□□□□□ -2
CD74P04233 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.55□□□□□ -2
CD74P04233 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.55□□□□□ -2
CD74P04233 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.55□□□□□ -2
CD74P04233 RNA5SP135-201ENST00000517019 125 ntBASIC2.55□□□□□ -2
CD74P04233 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.55□□□□□ -2
CD74P04233 AP000790.1-201ENST00000528891 737 ntBASIC2.55□□□□□ -2
CD74P04233 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.55□□□□□ -2
CD74P04233 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.55□□□□□ -2
CD74P04233 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.55□□□□□ -2
CD74P04233 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.55□□□□□ -2
CD74P04233 AL445435.1-201ENST00000604232 665 ntBASIC2.55□□□□□ -2
CD74P04233 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.55□□□□□ -2
CD74P04233 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.55□□□□□ -2
CD74P04233 AL020991.1-201ENST00000612314 373 ntBASIC2.55□□□□□ -2
CD74P04233 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.55□□□□□ -2
CD74P04233 AC008083.4-201ENST00000615076 444 ntBASIC2.55□□□□□ -2
CD74P04233 AC090116.1-201ENST00000615679 446 ntBASIC2.55□□□□□ -2
CD74P04233 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.55□□□□□ -2
CD74P04233 AC007275.1-201ENST00000621243 671 ntBASIC2.55□□□□□ -2
CD74P04233 AC010338.1-201ENST00000621823 717 ntBASIC2.55□□□□□ -2
CD74P04233 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.55□□□□□ -2
CD74P04233 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
CD74P04233 AC244258.1-201ENST00000637553 1071 ntBASIC2.55□□□□□ -2
CD74P04233 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.55□□□□□ -2
CD74P04233 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD74P04233 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CD74P04233 RNU6-839P-201ENST00000363347 108 ntBASIC2.54□□□□□ -2
CD74P04233 TMSB4XP8-201ENST00000402089 135 ntBASIC2.54□□□□□ -2
CD74P04233 AL121978.1-201ENST00000402778 359 ntBASIC2.54□□□□□ -2
CD74P04233 AL355143.1-201ENST00000407101 841 ntBASIC2.54□□□□□ -2
CD74P04233 RNA5SP38-201ENST00000410750 119 ntBASIC2.54□□□□□ -2
CD74P04233 TMSB4XP6-201ENST00000415187 135 ntBASIC2.54□□□□□ -2
CD74P04233 AC027644.1-201ENST00000419595 298 ntBASIC2.54□□□□□ -2
CD74P04233 BX842559.1-201ENST00000419615 532 ntBASIC2.54□□□□□ -2
CD74P04233 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.54□□□□□ -2
CD74P04233 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.54□□□□□ -2
CD74P04233 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.54□□□□□ -2
CD74P04233 UBE2D3P2-201ENST00000424409 445 ntBASIC2.54□□□□□ -2
CD74P04233 TMSB4XP1-201ENST00000424567 135 ntBASIC2.54□□□□□ -2
CD74P04233 RPS6P14-201ENST00000425165 719 ntBASIC2.54□□□□□ -2
CD74P04233 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.54□□□□□ -2
CD74P04233 AC005345.1-201ENST00000431868 217 ntBASIC2.54□□□□□ -2
CD74P04233 AL159987.2-201ENST00000432754 307 ntBASIC2.54□□□□□ -2
CD74P04233 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CD74P04233 UBBP3-201ENST00000445497 241 ntBASIC2.54□□□□□ -2
CD74P04233 Z96811.1-201ENST00000445880 108 ntBASIC2.54□□□□□ -2
CD74P04233 AC104073.1-201ENST00000451988 151 ntBASIC2.54□□□□□ -2
CD74P04233 MRPL42P4-201ENST00000453267 443 ntBASIC2.54□□□□□ -2
CD74P04233 AC008427.1-201ENST00000503102 655 ntBASIC2.54□□□□□ -2
CD74P04233 AC084024.2-201ENST00000503480 791 ntBASIC2.54□□□□□ -2
CD74P04233 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD74P04233 AC069306.1-201ENST00000507006 843 ntBASIC2.54□□□□□ -2
CD74P04233 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD74P04233 AC008837.1-201ENST00000511513 412 ntBASIC2.54□□□□□ -2
CD74P04233 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.54□□□□□ -2
CD74P04233 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.54□□□□□ -2
CD74P04233 OR10V3P-201ENST00000525712 725 ntBASIC2.54□□□□□ -2
CD74P04233 OR5B10P-201ENST00000532869 642 ntBASIC2.54□□□□□ -2
CD74P04233 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.54□□□□□ -2
CD74P04233 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.54□□□□□ -2
CD74P04233 AC087481.2-201ENST00000565492 330 ntBASIC2.54□□□□□ -2
CD74P04233 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.54□□□□□ -2
CD74P04233 AL031985.2-201ENST00000600955 480 ntBASIC2.54□□□□□ -2
CD74P04233 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.54□□□□□ -2
CD74P04233 AP003973.1-201ENST00000604639 691 ntBASIC2.54□□□□□ -2
CD74P04233 AC106791.2-201ENST00000604680 391 ntBASIC2.54□□□□□ -2
CD74P04233 AL159169.3-201ENST00000608871 561 ntBASIC2.54□□□□□ -2
CD74P04233 AC096577.2-201ENST00000611455 153 ntBASIC2.54□□□□□ -2
CD74P04233 AL359198.2-201ENST00000611836 194 ntBASIC2.54□□□□□ -2
CD74P04233 MIR7975-201ENST00000619350 68 ntBASIC2.54□□□□□ -2
CD74P04233 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.54□□□□□ -2
CD74P04233 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.54□□□□□ -2
CD74P04233 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.54□□□□□ -2
CD74P04233 MTND2P41-201ENST00000637599 773 ntBASIC2.54□□□□□ -2
CD74P04233 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.54□□□□□ -2
CD74P04233 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.54□□□□□ -2
CD74P04233 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
CD74P04233 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CD74P04233 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms