Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
COL4A1P02462 AP005901.5-201ENST00000545779 1796 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 AP001148.1-201ENST00000624124 2359 ntBASIC2.35□□□□□ -2.03
COL4A1P02462 RNU6-1263P-201ENST00000384601 106 ntBASIC2.34□□□□□ -2.03
COL4A1P02462 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
COL4A1P02462 YWHAZP7-201ENST00000436906 631 ntBASIC2.34□□□□□ -2.03
COL4A1P02462 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.34□□□□□ -2.03
COL4A1P02462 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.34□□□□□ -2.03
COL4A1P02462 AL049830.2-201ENST00000480072 201 ntBASIC2.34□□□□□ -2.03
COL4A1P02462 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
COL4A1P02462 RNU6-826P-201ENST00000516827 104 ntBASIC2.34□□□□□ -2.03
COL4A1P02462 AC007536.1-201ENST00000533382 349 ntBASIC2.34□□□□□ -2.03
COL4A1P02462 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.34□□□□□ -2.03
COL4A1P02462 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL4A1P02462 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL4A1P02462 FAM35CP-201ENST00000554755 2470 ntBASIC2.34□□□□□ -2.03
COL4A1P02462 AC114546.3-201ENST00000623582 1734 ntBASIC2.34□□□□□ -2.03
COL4A1P02462 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A1P02462 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
COL4A1P02462 RNU6-1140P-201ENST00000410517 106 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 LUZP4P1-201ENST00000415420 344 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 MTCO3P30-201ENST00000426425 670 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A1P02462 AC090543.1-201ENST00000492168 485 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A1P02462 MTCO3P42-201ENST00000509488 518 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 MTCO3P39-201ENST00000514812 518 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 NPM1P52-201ENST00000518264 846 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A1P02462 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A1P02462 MTND2P13-201ENST00000577438 1039 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 SNORD39.2-201ENST00000579995 76 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 MIR4303-201ENST00000581299 66 ntBASIC2.34□□□□□ -2.04
COL4A1P02462 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.34□□□□□ -2.04
COL4A1P02462 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A1P02462 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.34□□□□□ -2.04
COL4A1P02462 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
COL4A1P02462 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
COL4A1P02462 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.33□□□□□ -2.04
COL4A1P02462 Y_RNA.62-201ENST00000362840 99 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 RNU6-564P-201ENST00000410983 104 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 AC009414.1-201ENST00000427200 443 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 CR769767.1-201ENST00000436337 346 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.33□□□□□ -2.04
COL4A1P02462 AC012170.1-201ENST00000495139 359 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL4A1P02462 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC2.33□□□□□ -2.04
COL4A1P02462 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.33□□□□□ -2.04
COL4A1P02462 AC083899.3-201ENST00000603413 594 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 RPAP2P1-201ENST00000603626 1168 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 VIS1.1-201ENST00000610517 203 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 AC084768.2-201ENST00000622736 221 ntBASIC2.33□□□□□ -2.04
COL4A1P02462 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
COL4A1P02462 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A1P02462 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A1P02462 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.32□□□□□ -2.04
COL4A1P02462 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.32□□□□□ -2.04
COL4A1P02462 AL355994.1-201ENST00000424379 260 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.32□□□□□ -2.04
COL4A1P02462 CLIC4P1-201ENST00000453177 535 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 RNU6-717P-201ENST00000459076 104 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 TMEM248P1-201ENST00000510579 951 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A1P02462 AC025881.1-201ENST00000518851 512 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A1P02462 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.32□□□□□ -2.04
COL4A1P02462 AC128687.1-201ENST00000605304 619 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 snoU13.31-201ENST00000607291 104 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 AC107905.1-201ENST00000616204 426 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 XIST_intron.1-201ENST00000619444 68 ntBASIC2.32□□□□□ -2.04
COL4A1P02462 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
COL4A1P02462 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.32□□□□□ -2.04
COL4A1P02462 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A1P02462 RNU6-603P-201ENST00000411403 107 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 RPL23AP39-201ENST00000415533 405 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A1P02462 AC009237.8-201ENST00000445492 379 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 SNORD116-26-201ENST00000516006 96 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A1P02462 VN1R80P-201ENST00000597126 338 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 AC138473.1-201ENST00000605717 526 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 MIR8070-201ENST00000616510 88 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A1P02462 RNU6-661P-201ENST00000362409 107 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
COL4A1P02462 AL513331.1-201ENST00000411908 397 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A1P02462 RPL23AP36-201ENST00000413895 458 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 FNDC3CP-201ENST00000420795 1155 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 OR4K11P-201ENST00000431829 904 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A1P02462 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A1P02462 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.31□□□□□ -2.04
COL4A1P02462 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.31□□□□□ -2.04
COL4A1P02462 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.31□□□□□ -2.04
COL4A1P02462 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.31□□□□□ -2.04
COL4A1P02462 AC025857.1-201ENST00000525252 377 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 AC023043.2-201ENST00000589678 1026 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 AP003117.2-201ENST00000606010 545 ntBASIC2.31□□□□□ -2.04
COL4A1P02462 AL135786.2-201ENST00000608422 615 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms