Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.3□□□□□ -2.04
CPSF4O95639 MTND5P4-201ENST00000514978 288 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 RNA5SP320-201ENST00000516263 124 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 IGKV2D-36-201ENST00000518643 226 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 MTCYBP41-201ENST00000528913 1123 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.3□□□□□ -2.04
CPSF4O95639 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.3□□□□□ -2.04
CPSF4O95639 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.3□□□□□ -2.04
CPSF4O95639 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.3□□□□□ -2.04
CPSF4O95639 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 AL163153.1-201ENST00000554223 283 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 HMGB1P6-201ENST00000569046 646 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 MTCO3P24-201ENST00000572729 782 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 AC124283.4-201ENST00000581815 456 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.3□□□□□ -2.04
CPSF4O95639 AL645944.1-201ENST00000603857 493 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 AL009028.1-201ENST00000604895 802 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 AC135507.2-201ENST00000612443 309 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 VN1R7P-201ENST00000619242 903 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 PABPC1P7-201ENST00000413177 1513 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 ZNF849P-201ENST00000594711 1566 ntBASIC2.3□□□□□ -2.04
CPSF4O95639 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CPSF4O95639 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
CPSF4O95639 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CPSF4O95639 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CPSF4O95639 RNU6-7-201ENST00000364784 107 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 RNU6-8-201ENST00000365467 107 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 RNU6-1226P-201ENST00000384317 107 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 FAT1P1-201ENST00000406588 507 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC092638.1-201ENST00000411966 1275 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.29□□□□□ -2.04
CPSF4O95639 RPL7P10-201ENST00000417407 739 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC009237.2-201ENST00000421358 284 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC244098.2-201ENST00000422068 99 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC019097.1-201ENST00000424783 735 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 HIGD1AP11-201ENST00000438361 280 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 TRIM60P18-201ENST00000441518 828 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.29□□□□□ -2.04
CPSF4O95639 NAP1L1P3-201ENST00000462291 880 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CPSF4O95639 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.29□□□□□ -2.04
CPSF4O95639 AC112673.1-201ENST00000513168 575 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.29□□□□□ -2.04
CPSF4O95639 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.29□□□□□ -2.04
CPSF4O95639 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.29□□□□□ -2.04
CPSF4O95639 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CPSF4O95639 NIFKP8-201ENST00000560500 874 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.29□□□□□ -2.04
CPSF4O95639 MTCO1P40-201ENST00000574371 625 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 MIR4789-201ENST00000577469 82 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC090616.5-202ENST00000582111 297 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.29□□□□□ -2.04
CPSF4O95639 VN1R92P-201ENST00000598511 928 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AL513477.2-201ENST00000607858 568 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.29□□□□□ -2.04
CPSF4O95639 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AC068620.4-201ENST00000636730 1182 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AL590396.4-201ENST00000636779 956 ntBASIC2.29□□□□□ -2.04
CPSF4O95639 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CPSF4O95639 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CPSF4O95639 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.28□□□□□ -2.04
CPSF4O95639 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.28□□□□□ -2.04
CPSF4O95639 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
CPSF4O95639 RNU6-354P-201ENST00000383862 107 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 RNU6-610P-201ENST00000384264 107 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 RNU6-441P-201ENST00000384545 106 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 RNU6-932P-201ENST00000391108 106 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 RPL22P22-201ENST00000395439 379 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CPSF4O95639 AL138880.1-201ENST00000405824 642 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.28□□□□□ -2.04
CPSF4O95639 OR51A3P-201ENST00000413596 924 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 UBE2V1P9-201ENST00000414760 368 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.28□□□□□ -2.04
CPSF4O95639 TOMM22P1-201ENST00000418578 312 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.28□□□□□ -2.04
CPSF4O95639 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.28□□□□□ -2.04
CPSF4O95639 AC063976.3-201ENST00000426849 329 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 FO393414.1-201ENST00000428697 1184 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 AC114973.1-201ENST00000429057 632 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 AC006946.1-201ENST00000429106 328 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.28□□□□□ -2.04
CPSF4O95639 AC104332.2-201ENST00000429959 156 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.28□□□□□ -2.04
CPSF4O95639 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.28□□□□□ -2.04
CPSF4O95639 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.28□□□□□ -2.04
CPSF4O95639 AL096829.2-201ENST00000446582 742 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 OR51B8P-201ENST00000449892 769 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CPSF4O95639 AC093392.2-201ENST00000450682 337 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 SSXP4-201ENST00000451349 245 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 NF1P3-201ENST00000457709 450 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 RNU7-140P-201ENST00000459546 60 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 AL136126.1-201ENST00000473603 402 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 RPS3AP14-201ENST00000483907 780 ntBASIC2.28□□□□□ -2.04
CPSF4O95639 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms