Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.73□□□□□ -1.97
VAPBO95292 AC008173.1-201ENST00000418901 264 ntBASIC2.73□□□□□ -1.97
VAPBO95292 VN1R42P-201ENST00000424651 344 ntBASIC2.73□□□□□ -1.97
VAPBO95292 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.73□□□□□ -1.97
VAPBO95292 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
VAPBO95292 AC112220.1-201ENST00000434628 355 ntBASIC2.73□□□□□ -1.97
VAPBO95292 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.73□□□□□ -1.97
VAPBO95292 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.73□□□□□ -1.97
VAPBO95292 NANOGNBP1-201ENST00000448444 480 ntBASIC2.73□□□□□ -1.97
VAPBO95292 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.73□□□□□ -1.97
VAPBO95292 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.73□□□□□ -1.97
VAPBO95292 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.73□□□□□ -1.97
VAPBO95292 SNORA48.9-201ENST00000516419 162 ntBASIC2.73□□□□□ -1.97
VAPBO95292 SNORA70.24-201ENST00000517233 118 ntBASIC2.73□□□□□ -1.97
VAPBO95292 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.73□□□□□ -1.97
VAPBO95292 SETP2-201ENST00000553886 926 ntBASIC2.73□□□□□ -1.97
VAPBO95292 AL355836.1-201ENST00000555951 870 ntBASIC2.73□□□□□ -1.97
VAPBO95292 BNIP3P33-201ENST00000598912 569 ntBASIC2.73□□□□□ -1.97
VAPBO95292 GAS5-AS1-201ENST00000602767 694 ntBASIC2.73□□□□□ -1.97
VAPBO95292 AC093732.2-201ENST00000607950 274 ntBASIC2.73□□□□□ -1.97
VAPBO95292 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.73□□□□□ -1.97
VAPBO95292 CR381653.2-201ENST00000624041 768 ntBASIC2.73□□□□□ -1.97
VAPBO95292 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
VAPBO95292 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.72□□□□□ -1.97
VAPBO95292 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VAPBO95292 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VAPBO95292 RNA5SP139-201ENST00000364340 117 ntBASIC2.72□□□□□ -1.97
VAPBO95292 MIR493-201ENST00000385254 89 ntBASIC2.72□□□□□ -1.97
VAPBO95292 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.72□□□□□ -1.97
VAPBO95292 AL138827.1-201ENST00000402666 306 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AL133384.1-201ENST00000412744 351 ntBASIC2.72□□□□□ -1.97
VAPBO95292 RPS15AP38-201ENST00000413110 372 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AL645937.1-202ENST00000421799 937 ntBASIC2.72□□□□□ -1.97
VAPBO95292 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPBO95292 RPL23AP58-201ENST00000440453 469 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AL135938.1-201ENST00000443141 297 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AL589880.1-201ENST00000448271 287 ntBASIC2.72□□□□□ -1.97
VAPBO95292 NDUFA5P7-201ENST00000452914 242 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC008571.1-201ENST00000467232 300 ntBASIC2.72□□□□□ -1.97
VAPBO95292 PABPC1P3-201ENST00000469174 459 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPBO95292 NUP58P1-201ENST00000502546 1738 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC093767.1-201ENST00000504523 156 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC026427.2-201ENST00000506228 536 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC098799.2-201ENST00000509466 868 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.72□□□□□ -1.97
VAPBO95292 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPBO95292 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.72□□□□□ -1.97
VAPBO95292 AC113192.3-201ENST00000529152 742 ntBASIC2.72□□□□□ -1.97
VAPBO95292 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.72□□□□□ -1.97
VAPBO95292 EEF1B2P4-201ENST00000551398 348 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.72□□□□□ -1.97
VAPBO95292 AC104229.1-201ENST00000561364 255 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC012669.1-201ENST00000603209 283 ntBASIC2.72□□□□□ -1.97
VAPBO95292 NUTF2P8-201ENST00000604593 363 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC245100.7-201ENST00000609678 442 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AL138880.2-201ENST00000616214 239 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC007275.1-201ENST00000621243 671 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC106730.3-201ENST00000624568 641 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.72□□□□□ -1.97
VAPBO95292 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.72□□□□□ -1.97
VAPBO95292 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.97
VAPBO95292 AC109315.1-201ENST00000584143 1347 ntBASIC2.71□□□□□ -1.98
VAPBO95292 MFSD8-213ENST00000641134 1327 ntBASIC2.71□□□□□ -1.98
VAPBO95292 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VAPBO95292 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.71□□□□□ -1.98
VAPBO95292 RNU1-112P-201ENST00000364401 164 ntBASIC2.71□□□□□ -1.98
VAPBO95292 MIR592-201ENST00000384959 97 ntBASIC2.71□□□□□ -1.98
VAPBO95292 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPBO95292 AC087499.2-201ENST00000432861 149 ntBASIC2.71□□□□□ -1.98
VAPBO95292 MTND4LP10-201ENST00000435146 291 ntBASIC2.71□□□□□ -1.98
VAPBO95292 RNFT1P2-201ENST00000443064 757 ntBASIC2.71□□□□□ -1.98
VAPBO95292 MTCO3P2-201ENST00000457365 171 ntBASIC2.71□□□□□ -1.98
VAPBO95292 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPBO95292 AC090525.1-201ENST00000479116 478 ntBASIC2.71□□□□□ -1.98
VAPBO95292 AC011825.1-201ENST00000484967 388 ntBASIC2.71□□□□□ -1.98
VAPBO95292 CBX3P3-201ENST00000508108 532 ntBASIC2.71□□□□□ -1.98
VAPBO95292 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.71□□□□□ -1.98
VAPBO95292 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPBO95292 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.71□□□□□ -1.98
VAPBO95292 MTATP6P25-201ENST00000574491 261 ntBASIC2.71□□□□□ -1.98
VAPBO95292 SNORD39.3-201ENST00000584451 71 ntBASIC2.71□□□□□ -1.98
VAPBO95292 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.71□□□□□ -1.98
VAPBO95292 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.71□□□□□ -1.98
VAPBO95292 AC040174.2-201ENST00000602701 465 ntBASIC2.71□□□□□ -1.98
VAPBO95292 AC010738.1-201ENST00000604970 987 ntBASIC2.71□□□□□ -1.98
VAPBO95292 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.71□□□□□ -1.98
VAPBO95292 BX649567.1-201ENST00000642071 1134 ntBASIC2.71□□□□□ -1.98
VAPBO95292 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
VAPBO95292 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
VAPBO95292 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.7□□□□□ -1.98
VAPBO95292 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
VAPBO95292 SGO1P1-201ENST00000603525 1447 ntBASIC2.7□□□□□ -1.98
VAPBO95292 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.7□□□□□ -1.98
VAPBO95292 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
VAPBO95292 RNU6-115P-201ENST00000364310 107 ntBASIC2.7□□□□□ -1.98
VAPBO95292 RNA5SP252-201ENST00000391131 119 ntBASIC2.7□□□□□ -1.98
VAPBO95292 RPL21P75-201ENST00000396599 483 ntBASIC2.7□□□□□ -1.98
VAPBO95292 RPL21P28-201ENST00000401418 483 ntBASIC2.7□□□□□ -1.98
VAPBO95292 AL592114.1-201ENST00000403842 483 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms