Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 MIR5195-201ENST00000583555 115 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC083760.1-201ENST00000589621 670 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AL669831.4-202ENST00000590817 238 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.77□□□□□ -1.97
SEMA3DO95025 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.77□□□□□ -1.97
SEMA3DO95025 AC106791.2-201ENST00000604680 391 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC090115.4-201ENST00000609970 188 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC078880.5-201ENST00000617845 421 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 AC091953.5-201ENST00000622919 233 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SEMA3DO95025 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SEMA3DO95025 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.77□□□□□ -1.97
SEMA3DO95025 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.77□□□□□ -1.97
SEMA3DO95025 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.76□□□□□ -1.97
SEMA3DO95025 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SEMA3DO95025 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SEMA3DO95025 RNVU1-3-201ENST00000364313 161 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 RNU6-339P-201ENST00000384310 107 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 SNORD88.1-201ENST00000408684 91 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 BX682237.1-201ENST00000415016 335 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 SFR1P2-201ENST00000421841 730 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AL035410.1-201ENST00000427409 427 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 AL451062.2-201ENST00000427515 271 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 UBE2V1P6-201ENST00000430840 422 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 MUPP-201ENST00000438111 566 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 AC000041.1-201ENST00000439655 175 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 RABEPKP1-201ENST00000440529 1026 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC112492.1-201ENST00000449607 712 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.76□□□□□ -1.97
SEMA3DO95025 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC087373.1-201ENST00000524920 491 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.76□□□□□ -1.97
SEMA3DO95025 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC023043.3-201ENST00000593113 385 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 AL513477.2-201ENST00000607858 568 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SEMA3DO95025 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC068722.2-201ENST00000618734 544 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.76□□□□□ -1.97
SEMA3DO95025 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.76□□□□□ -1.97
SEMA3DO95025 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.76□□□□□ -1.97
SEMA3DO95025 AC073346.2-201ENST00000624724 2058 ntBASIC2.76□□□□□ -1.97
SEMA3DO95025 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SEMA3DO95025 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
SEMA3DO95025 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SEMA3DO95025 RNU6-207P-201ENST00000384137 107 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 MIR512-1-201ENST00000384913 84 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 RNA5SP38-201ENST00000410750 119 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 RNU6-575P-201ENST00000411326 105 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.75□□□□□ -1.97
SEMA3DO95025 FNDC3CP-201ENST00000420795 1155 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.75□□□□□ -1.97
SEMA3DO95025 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.75□□□□□ -1.97
SEMA3DO95025 NDUFA5P7-201ENST00000452914 242 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.75□□□□□ -1.97
SEMA3DO95025 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SEMA3DO95025 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SEMA3DO95025 OR5H5P-201ENST00000503164 928 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SEMA3DO95025 SEM1P1-201ENST00000506694 209 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AC117522.3-201ENST00000507974 584 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AC026412.2-201ENST00000512270 1075 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SEMA3DO95025 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.75□□□□□ -1.97
SEMA3DO95025 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.75□□□□□ -1.97
SEMA3DO95025 NBEAP1-201ENST00000554452 979 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.75□□□□□ -1.97
SEMA3DO95025 COX6CP3-201ENST00000580869 223 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 MIR4325-201ENST00000583049 90 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.75□□□□□ -1.97
SEMA3DO95025 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.75□□□□□ -1.97
SEMA3DO95025 AC002487.1-201ENST00000604565 994 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AL133507.1-201ENST00000605269 557 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AL158211.2-201ENST00000607282 395 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.75□□□□□ -1.97
SEMA3DO95025 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.75□□□□□ -1.97
SEMA3DO95025 AC009039.2-201ENST00000624524 529 ntBASIC2.75□□□□□ -1.97
SEMA3DO95025 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SEMA3DO95025 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
SEMA3DO95025 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SEMA3DO95025 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SEMA3DO95025 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.74□□□□□ -1.97
SEMA3DO95025 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
SEMA3DO95025 RNU1-140P-201ENST00000365040 165 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 RNU6-761P-201ENST00000384148 107 ntBASIC2.74□□□□□ -1.97
SEMA3DO95025 SNORA48.5-201ENST00000391143 135 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms