Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RPS12P17-201ENST00000438591 377 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 OR2AO1P-201ENST00000476497 403 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 RN7SL184P-201ENST00000488308 297 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 AC110792.1-201ENST00000491826 472 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA2O43364 NDUFB4P9-201ENST00000511646 388 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 SNORA70.11-201ENST00000515987 138 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 SNORA70.13-201ENST00000516116 138 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA2O43364 IGLV3-30-201ENST00000524362 298 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA2O43364 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
HOXA2O43364 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXA2O43364 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
HOXA2O43364 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXA2O43364 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA2O43364 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 AP001282.2-201ENST00000616149 309 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA2O43364 LINC01963-201ENST00000562038 3148 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXA2O43364 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA2O43364 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXA2O43364 AC006484.1-201ENST00000435086 1884 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA2O43364 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXA2O43364 PABPC1P8-201ENST00000452851 2086 ntBASIC6.26□□□□□ -1.41
HOXA2O43364 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA2O43364 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXA2O43364 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HOXA2O43364 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXA2O43364 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA2O43364 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA2O43364 RNU6-817P-201ENST00000391083 104 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 AP003170.5-201ENST00000397185 335 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA2O43364 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA2O43364 AC008945.1-201ENST00000505144 499 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXA2O43364 RN7SKP82-201ENST00000516786 223 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 Y_RNA.703-201ENST00000516846 111 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXA2O43364 MIR132-201ENST00000591554 101 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 AC073410.2-201ENST00000603240 332 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 AC211433.2-201ENST00000608433 387 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXA2O43364 FP236240.3-201ENST00000623061 327 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 AC127459.3-201ENST00000624328 466 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXA2O43364 AL596275.2-208ENST00000641192 594 ntBASIC6.25□□□□□ -1.41
HOXA2O43364 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA2O43364 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXA2O43364 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXA2O43364 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA2O43364 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HOXA2O43364 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA2O43364 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXA2O43364 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXA2O43364 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA2O43364 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXA2O43364 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXA2O43364 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXA2O43364 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
HOXA2O43364 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXA2O43364 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA2O43364 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXA2O43364 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
HOXA2O43364 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
HOXA2O43364 AL391987.6-201ENST00000305671 199 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 RNU1-76P-201ENST00000362903 159 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 Y_RNA.291-201ENST00000364886 113 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 Y_RNA.352-201ENST00000365439 102 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
HOXA2O43364 RNU6-187P-201ENST00000384139 106 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.24□□□□□ -1.41
HOXA2O43364 RNU6-603P-201ENST00000411403 107 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AC116036.1-201ENST00000412199 367 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 RPL21P90-201ENST00000415692 466 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.24□□□□□ -1.41
HOXA2O43364 AC007098.1-201ENST00000420122 367 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 RPEP5-201ENST00000441137 268 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXA2O43364 Z92846.1-201ENST00000456203 268 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 RN7SL583P-201ENST00000475692 287 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 RPL32P33-201ENST00000487023 394 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXA2O43364 RPS4XP20-201ENST00000505751 772 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AC005798.1-201ENST00000513715 387 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 RN7SKP288-201ENST00000516227 268 ntBASIC6.24□□□□□ -1.41
HOXA2O43364 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXA2O43364 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.24□□□□□ -1.41
HOXA2O43364 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.24□□□□□ -1.41
HOXA2O43364 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms