Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 MIR4504-201ENST00000577413 92 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AC061975.8-201ENST00000587058 721 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.39□□□□□ -2.03
UBFD1O14562 AL390240.1-201ENST00000612950 384 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 AC025016.1-201ENST00000616746 682 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 SNHG22-203ENST00000617833 660 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.39□□□□□ -2.03
UBFD1O14562 AL121594.5-201ENST00000631724 573 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
UBFD1O14562 MAPK10-322ENST00000641485 4530 ntBASIC2.39□□□□□ -2.03
UBFD1O14562 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
UBFD1O14562 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
UBFD1O14562 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
UBFD1O14562 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
UBFD1O14562 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.38□□□□□ -2.03
UBFD1O14562 RNU6-252P-201ENST00000363232 107 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 RNU6-1005P-201ENST00000384519 107 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 MIR27B-201ENST00000385129 97 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 MIR34A-201ENST00000385130 110 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
UBFD1O14562 DSTNP4-201ENST00000399472 474 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 FAT1P1-201ENST00000406588 507 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 MIR1261-201ENST00000408659 82 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 RPL23AP58-201ENST00000440453 469 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 RPL17P49-201ENST00000443728 411 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 AC009961.3-201ENST00000449832 765 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.38□□□□□ -2.03
UBFD1O14562 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 AC046144.1-201ENST00000478559 1853 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.38□□□□□ -2.03
UBFD1O14562 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
UBFD1O14562 MTCO2P32-201ENST00000514865 403 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 AP003467.2-201ENST00000520175 319 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.38□□□□□ -2.03
UBFD1O14562 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.38□□□□□ -2.03
UBFD1O14562 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 OR4G1P-201ENST00000588632 938 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 AP002907.1-201ENST00000606361 1430 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 VN1R7P-201ENST00000619242 903 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 AL356118.1-201ENST00000635272 1078 ntBASIC2.38□□□□□ -2.03
UBFD1O14562 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
UBFD1O14562 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
UBFD1O14562 ZNF37BP-203ENST00000452306 1352 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
UBFD1O14562 RNU6-263P-201ENST00000363811 107 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 RNU1-51P-201ENST00000365345 176 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 MIR518C-201ENST00000384822 101 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 RNU2-17P-201ENST00000410290 190 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 ARL2BPP3-201ENST00000421226 480 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.37□□□□□ -2.03
UBFD1O14562 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.37□□□□□ -2.03
UBFD1O14562 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.37□□□□□ -2.03
UBFD1O14562 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.37□□□□□ -2.03
UBFD1O14562 RAB11AP1-201ENST00000442978 646 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.37□□□□□ -2.03
UBFD1O14562 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 UBBP3-201ENST00000445497 241 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 Z96811.1-201ENST00000445880 108 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.37□□□□□ -2.03
UBFD1O14562 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
UBFD1O14562 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
UBFD1O14562 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.37□□□□□ -2.03
UBFD1O14562 OR9N1P-202ENST00000494289 481 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.37□□□□□ -2.03
UBFD1O14562 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
UBFD1O14562 RN7SKP24-201ENST00000515888 284 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AP002770.2-201ENST00000543613 532 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AC125611.2-201ENST00000551907 647 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AC009097.3-201ENST00000563557 1018 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 ATP5F1P7-201ENST00000567330 760 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 BX322635.1-201ENST00000605804 496 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AC090617.9-201ENST00000623751 147 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AC092608.2-201ENST00000624427 218 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 AL136520.1-201ENST00000600311 1322 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.37□□□□□ -2.03
UBFD1O14562 AP001350.1-201ENST00000601906 1524 ntBASIC2.37□□□□□ -2.03
UBFD1O14562 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
UBFD1O14562 AC083799.1-201ENST00000366451 910 ntBASIC2.36□□□□□ -2.03
UBFD1O14562 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
UBFD1O14562 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
UBFD1O14562 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.36□□□□□ -2.03
UBFD1O14562 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.36□□□□□ -2.03
UBFD1O14562 RPS6P14-201ENST00000425165 719 ntBASIC2.36□□□□□ -2.03
UBFD1O14562 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.36□□□□□ -2.03
UBFD1O14562 UBE2V1P5-201ENST00000440070 405 ntBASIC2.36□□□□□ -2.03
UBFD1O14562 RPS26P30-201ENST00000443431 335 ntBASIC2.36□□□□□ -2.03
UBFD1O14562 AL513124.1-201ENST00000450410 614 ntBASIC2.36□□□□□ -2.03
UBFD1O14562 AC108938.1-201ENST00000451204 136 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms