Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 RNU1-94P-201ENST00000362627 173 ntBASIC5.42□□□□□ -1.54
SOX1O00570 RNU1-130P-201ENST00000363930 160 ntBASIC5.42□□□□□ -1.54
SOX1O00570 RNU6-61P-201ENST00000365528 109 ntBASIC5.42□□□□□ -1.54
SOX1O00570 SNORA24.1-201ENST00000384401 135 ntBASIC5.42□□□□□ -1.54
SOX1O00570 Y_RNA.576-201ENST00000384781 102 ntBASIC5.42□□□□□ -1.54
SOX1O00570 AL391417.1-201ENST00000404100 426 ntBASIC5.42□□□□□ -1.54
SOX1O00570 RNU2-36P-201ENST00000410361 191 ntBASIC5.42□□□□□ -1.54
SOX1O00570 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX1O00570 RPL6P29-201ENST00000414863 865 ntBASIC5.42□□□□□ -1.54
SOX1O00570 RPL7P10-201ENST00000417407 739 ntBASIC5.42□□□□□ -1.54
SOX1O00570 PDSS1P1-201ENST00000422953 1114 ntBASIC5.42□□□□□ -1.54
SOX1O00570 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 AC092651.1-201ENST00000426110 312 ntBASIC5.42□□□□□ -1.54
SOX1O00570 RPL23AP89-201ENST00000439324 255 ntBASIC5.42□□□□□ -1.54
SOX1O00570 RPL12P25-201ENST00000455592 494 ntBASIC5.42□□□□□ -1.54
SOX1O00570 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX1O00570 AC128713.1-201ENST00000471495 306 ntBASIC5.42□□□□□ -1.54
SOX1O00570 AC104806.1-201ENST00000508720 308 ntBASIC5.42□□□□□ -1.54
SOX1O00570 RN7SKP67-201ENST00000515905 235 ntBASIC5.42□□□□□ -1.54
SOX1O00570 RNU6-189P-201ENST00000516120 101 ntBASIC5.42□□□□□ -1.54
SOX1O00570 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.42□□□□□ -1.54
SOX1O00570 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX1O00570 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX1O00570 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.42□□□□□ -1.54
SOX1O00570 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.42□□□□□ -1.54
SOX1O00570 AL133153.1-201ENST00000557756 303 ntBASIC5.42□□□□□ -1.54
SOX1O00570 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 AC007485.1-201ENST00000616755 206 ntBASIC5.42□□□□□ -1.54
SOX1O00570 AC010378.1-201ENST00000619270 362 ntBASIC5.42□□□□□ -1.54
SOX1O00570 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 AC073869.8-201ENST00000641806 335 ntBASIC5.42□□□□□ -1.54
SOX1O00570 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
SOX1O00570 MTND5P30-201ENST00000452896 1731 ntBASIC5.42□□□□□ -1.54
SOX1O00570 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SOX1O00570 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX1O00570 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SOX1O00570 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SOX1O00570 ZNF519P1-201ENST00000449011 1626 ntBASIC5.41□□□□□ -1.54
SOX1O00570 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.41□□□□□ -1.54
SOX1O00570 PNPT1P2-201ENST00000456768 2050 ntBASIC5.41□□□□□ -1.54
SOX1O00570 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.41□□□□□ -1.54
SOX1O00570 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX1O00570 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SOX1O00570 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX1O00570 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SOX1O00570 SNORD1C-201ENST00000363315 78 ntBASIC5.41□□□□□ -1.54
SOX1O00570 RNU1-59P-201ENST00000364829 162 ntBASIC5.41□□□□□ -1.54
SOX1O00570 SNORA70.9-201ENST00000384370 135 ntBASIC5.41□□□□□ -1.54
SOX1O00570 AL590762.2-201ENST00000395798 571 ntBASIC5.41□□□□□ -1.54
SOX1O00570 SOD2P1-201ENST00000396543 562 ntBASIC5.41□□□□□ -1.54
SOX1O00570 MIR450B-201ENST00000401182 78 ntBASIC5.41□□□□□ -1.54
SOX1O00570 RNU6-387P-201ENST00000411331 105 ntBASIC5.41□□□□□ -1.54
SOX1O00570 BX323845.1-201ENST00000432417 179 ntBASIC5.41□□□□□ -1.54
SOX1O00570 AC105402.2-201ENST00000438503 358 ntBASIC5.41□□□□□ -1.54
SOX1O00570 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SOX1O00570 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX1O00570 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX1O00570 snoU13.7-201ENST00000459220 104 ntBASIC5.41□□□□□ -1.54
SOX1O00570 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX1O00570 AC006499.6-201ENST00000511169 607 ntBASIC5.41□□□□□ -1.54
SOX1O00570 ENPP7P9-201ENST00000514456 627 ntBASIC5.41□□□□□ -1.54
SOX1O00570 snoU109.6-201ENST00000516831 118 ntBASIC5.41□□□□□ -1.54
SOX1O00570 RNU6-1213P-201ENST00000517075 94 ntBASIC5.41□□□□□ -1.54
SOX1O00570 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX1O00570 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX1O00570 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX1O00570 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX1O00570 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.41□□□□□ -1.54
SOX1O00570 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX1O00570 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX1O00570 PRR13P7-201ENST00000605538 430 ntBASIC5.41□□□□□ -1.54
SOX1O00570 U1.25-201ENST00000614085 162 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms