Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PTENP1-201ENST00000447117 1215 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 AC097262.1-201ENST00000452559 548 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM1O00151 SNORD105B-201ENST00000458770 79 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 AC023598.1-201ENST00000472521 361 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.2□□□□□ -1.9
PDLIM1O00151 AC106707.2-201ENST00000484182 374 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM1O00151 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.2□□□□□ -1.9
PDLIM1O00151 RNU6-56P-201ENST00000516986 93 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 SNORA31.20-201ENST00000517111 133 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM1O00151 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM1O00151 SLC2A13P1-201ENST00000531560 322 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM1O00151 HIGD1AP17-201ENST00000554576 276 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM1O00151 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM1O00151 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM1O00151 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.2□□□□□ -1.9
PDLIM1O00151 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.2□□□□□ -1.9
PDLIM1O00151 MIR1254-2-201ENST00000579553 63 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 BNIP3P24-201ENST00000593398 557 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 DUXAP3-201ENST00000603616 594 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM1O00151 AL078595.3-201ENST00000623815 1166 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PDLIM1O00151 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM1O00151 AC090897.3-201ENST00000636973 1157 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 OR8B1P-202ENST00000641132 1178 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 AC009093.8-201ENST00000641769 292 ntBASIC3.2□□□□□ -1.9
PDLIM1O00151 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
PDLIM1O00151 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.2□□□□□ -1.9
PDLIM1O00151 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM1O00151 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM1O00151 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM1O00151 SNORD9-201ENST00000362566 104 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RNU6-878P-201ENST00000384578 110 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 SNORA48.7-201ENST00000391302 135 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RPL21P75-201ENST00000396599 483 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RPL21P28-201ENST00000401418 483 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AL592114.1-201ENST00000403842 483 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RNU4-65P-201ENST00000410473 140 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RNU2-15P-201ENST00000410692 191 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RPS7P15-201ENST00000415804 584 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RAD23BP2-201ENST00000416003 1207 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 DBIP2-201ENST00000419076 262 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.19□□□□□ -1.9
PDLIM1O00151 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM1O00151 RPL23AP74-201ENST00000437246 471 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM1O00151 RPL23AP20-201ENST00000447965 421 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 OFD1P3Y-201ENST00000453312 783 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RPL21P39-201ENST00000463605 483 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RPL23AP67-201ENST00000465341 474 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RPL21P93-201ENST00000480465 489 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC233702.1-201ENST00000482905 502 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC087190.1-201ENST00000484462 480 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC093591.1-201ENST00000491435 481 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RPL21P16-201ENST00000495531 483 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM1O00151 HSPD1P15-201ENST00000505573 1122 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM1O00151 RN7SKP13-201ENST00000515933 244 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 RN7SKP18-201ENST00000516005 275 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM1O00151 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PDLIM1O00151 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.19□□□□□ -1.9
PDLIM1O00151 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM1O00151 AL121603.1-201ENST00000553815 142 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 SETP2-201ENST00000553886 926 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.19□□□□□ -1.9
PDLIM1O00151 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM1O00151 AL359198.2-201ENST00000611836 194 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC109809.1-201ENST00000619665 545 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 U4.6-201ENST00000621618 127 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM1O00151 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM1O00151 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM1O00151 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM1O00151 AL034408.1-202ENST00000636088 415 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 MIR1322-201ENST00000638013 71 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM1O00151 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.19□□□□□ -1.9
PDLIM1O00151 AC093908.1-201ENST00000623125 8092 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM1O00151 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 MFSD8-233ENST00000641482 4860 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
PDLIM1O00151 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
PDLIM1O00151 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PDLIM1O00151 AL365440.1-201ENST00000436135 2167 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.18□□□□□ -1.9
PDLIM1O00151 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.18□□□□□ -1.9
PDLIM1O00151 RNU4-92P-201ENST00000363783 136 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 SNORA46-201ENST00000384762 135 ntBASIC3.18□□□□□ -1.9
PDLIM1O00151 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PDLIM1O00151 RNU6-1242P-201ENST00000391052 103 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms