Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC093278.1-201ENST00000494700 600 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 DYNLL1P6-201ENST00000503440 264 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC011492.1-201ENST00000600023 315 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC007620.3-201ENST00000608131 497 ntBASIC1.62□□□□□ -2.15
COL6A5A8TX70 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.62□□□□□ -2.15
COL6A5A8TX70 AC093831.2-201ENST00000624393 3427 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 MIR21-201ENST00000362134 72 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 SNORD114-22-201ENST00000365423 72 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 ATP5F1P1-201ENST00000433775 569 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 GAPDHP27-201ENST00000447427 1020 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC125238.1-201ENST00000448842 249 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 AL139109.1-201ENST00000455491 297 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC012182.1-201ENST00000570133 895 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC009831.4-201ENST00000620744 325 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 MIR6086-201ENST00000638065 55 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A5A8TX70 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A5A8TX70 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A5A8TX70 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A5A8TX70 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 MTND5P35-201ENST00000557537 1720 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A5A8TX70 RPS20P25-201ENST00000412447 352 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC005005.2-201ENST00000420779 380 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 RWDD4P2-201ENST00000426392 563 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 snoU109.4-201ENST00000458953 143 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 RWDD4P1-201ENST00000488019 565 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC021087.2-201ENST00000504656 1203 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 ATP5EP1-201ENST00000510257 156 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 USP9YP5-201ENST00000511770 630 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.61□□□□□ -2.15
COL6A5A8TX70 MTND4LP5-201ENST00000605152 292 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 AC103810.8-201ENST00000607347 118 ntBASIC1.61□□□□□ -2.15
COL6A5A8TX70 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL6A5A8TX70 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL6A5A8TX70 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 EI24P1-201ENST00000416584 867 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AL645939.1-201ENST00000453429 797 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 EIF2S2P4-201ENST00000461070 984 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AL845331.3-202ENST00000562856 261 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC120053.1-201ENST00000607706 736 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC110774.1-201ENST00000623567 2018 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 DEFB109C-201ENST00000382575 264 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 DEFB109B-201ENST00000382656 264 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 USP9YP33-201ENST00000412220 421 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC013404.1-201ENST00000413068 249 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 USP9YP35-201ENST00000435696 412 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 MTCYBP31-201ENST00000438855 1122 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 AL162388.1-201ENST00000450912 352 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC004263.1-201ENST00000479327 332 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 RNU6-1231P-201ENST00000517185 103 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 CBX3P5-201ENST00000552017 521 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC110588.1-201ENST00000559699 137 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC091953.2-201ENST00000623979 160 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
COL6A5A8TX70 AC066616.2-201ENST00000559334 1481 ntBASIC1.6□□□□□ -2.15
COL6A5A8TX70 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 RPL30P3-201ENST00000424262 333 ntBASIC1.59□□□□□ -2.15
COL6A5A8TX70 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 RPL23AP35-201ENST00000451906 501 ntBASIC1.59□□□□□ -2.15
COL6A5A8TX70 RPS27P29-201ENST00000463110 252 ntBASIC1.59□□□□□ -2.15
COL6A5A8TX70 LINC00888-204ENST00000487386 421 ntBASIC1.59□□□□□ -2.15
COL6A5A8TX70 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 AC016957.1-201ENST00000534895 309 ntBASIC1.59□□□□□ -2.15
COL6A5A8TX70 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
COL6A5A8TX70 PNPT1P2-201ENST00000456768 2050 ntBASIC1.59□□□□□ -2.15
COL6A5A8TX70 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.59□□□□□ -2.15
COL6A5A8TX70 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.59□□□□□ -2.16
COL6A5A8TX70 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
COL6A5A8TX70 RNY1P4-201ENST00000384595 115 ntBASIC1.59□□□□□ -2.16
COL6A5A8TX70 AL445685.2-201ENST00000422551 342 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms