Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 XKRYP6-201ENST00000440468 1116 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 XKRYP3-201ENST00000442113 1116 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 SSXP4-201ENST00000451349 245 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC090453.1-201ENST00000495560 436 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC010486.1-201ENST00000511793 424 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 HSPE1P18-201ENST00000517602 280 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC022790.1-201ENST00000522872 204 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC234775.3-201ENST00000564612 656 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC024614.2-201ENST00000577584 372 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 MIR5694-201ENST00000581190 76 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC006329.2-201ENST00000611491 394 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC098657.3-201ENST00000620434 263 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 AC093536.2-201ENST00000565257 1406 ntBASIC1.65□□□□□ -2.15
CPSF4LA6NMK7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 NACA3P-201ENST00000359690 648 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 U8.2-201ENST00000363156 134 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 RNU6-304P-201ENST00000364855 107 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 CYCSP45-201ENST00000402289 315 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 AC019129.1-201ENST00000403786 261 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 RPL31P2-201ENST00000413849 377 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 SMC4P1-201ENST00000414479 527 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 AL137014.1-201ENST00000420490 1226 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 SUMO1P4-201ENST00000429430 302 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 AC236972.1-201ENST00000433225 199 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 TPT1P14-201ENST00000448018 505 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 DNAJC19P8-201ENST00000452887 259 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 HMGN2P16-201ENST00000456802 261 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 RNU6-1218P-201ENST00000458990 108 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 RPS29P11-201ENST00000496507 171 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 AC125611.2-201ENST00000551907 647 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 AC091544.4-201ENST00000555268 342 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 MIR4648-201ENST00000580107 72 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 ZNF355P-201ENST00000427301 3216 ntBASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.64□□□□□ -2.15
CPSF4LA6NMK7 Y_RNA.111-201ENST00000363248 100 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 SET-203ENST00000372688 801 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 Y_RNA.500-201ENST00000384466 111 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 RN7SKP192-201ENST00000411291 327 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 RPS6P14-201ENST00000425165 719 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 ELOCP6-201ENST00000429066 328 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 HMGB1P12-201ENST00000438594 598 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 USP9YP15-201ENST00000442391 422 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 ELOCP12-201ENST00000458706 328 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 RPS23P3-201ENST00000470993 430 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 HMGN2P13-201ENST00000476476 274 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC017007.3-201ENST00000479865 435 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 RPL21P99-201ENST00000480369 423 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC010625.1-201ENST00000511296 403 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 NOP56P3-201ENST00000549457 385 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC007375.1-201ENST00000554513 578 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC110588.1-201ENST00000559699 137 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AC090751.1-201ENST00000566966 267 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 MIR3618-201ENST00000580330 88 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AL109653.1-201ENST00000603091 248 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AP003117.2-201ENST00000606010 545 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AL109809.4-201ENST00000603520 2185 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 AL157700.1-201ENST00000561973 1432 ntBASIC1.63□□□□□ -2.15
CPSF4LA6NMK7 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 RFESDP1-201ENST00000422350 461 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 RPL21P104-201ENST00000464143 478 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 RPS29P20-201ENST00000489592 171 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AC107393.1-201ENST00000512403 346 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AC118465.1-201ENST00000513820 1271 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 IGKV2-36-201ENST00000519999 223 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AF279873.1-201ENST00000523393 313 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AL121839.1-201ENST00000556233 1185 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 MIR5194-201ENST00000582634 120 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AC090312.2-201ENST00000582687 378 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms