Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.87□□□□□ -1.79
LRRC53A6NM62 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.87□□□□□ -1.79
LRRC53A6NM62 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.87□□□□□ -1.79
LRRC53A6NM62 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC53A6NM62 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC53A6NM62 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.87□□□□□ -1.79
LRRC53A6NM62 PABPC1P9-201ENST00000426076 1612 ntBASIC3.87□□□□□ -1.79
LRRC53A6NM62 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
LRRC53A6NM62 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC53A6NM62 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.87□□□□□ -1.79
LRRC53A6NM62 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC53A6NM62 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LRRC53A6NM62 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LRRC53A6NM62 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 Y_RNA.97-201ENST00000363094 102 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 RNU6-501P-201ENST00000364072 100 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 RNU6-335P-201ENST00000364563 113 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 SNORD116-1-201ENST00000384335 95 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 RNU6-1207P-201ENST00000384343 107 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 RNU6-769P-201ENST00000384407 104 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 SNORA26.8-201ENST00000391306 124 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC025750.1-201ENST00000399891 379 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 SKINT1L-201ENST00000401057 817 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 MIR1305-201ENST00000408300 86 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 RNU6-628P-201ENST00000410675 107 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 NPM1P11-201ENST00000417106 855 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC091862.1-201ENST00000438016 1100 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC118469.1-201ENST00000442943 488 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 Z82190.1-201ENST00000454534 490 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC004801.2-202ENST00000463559 283 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 ST13P14-201ENST00000474095 734 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC109486.1-201ENST00000486833 374 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AP001025.2-201ENST00000490908 477 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 DSTNP2-201ENST00000504533 515 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC006499.5-201ENST00000505037 514 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC023141.12-201ENST00000512399 199 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 ARL2BPP6-201ENST00000512757 439 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AP004371.1-201ENST00000525240 214 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LRRC53A6NM62 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 PCMTD1P2-201ENST00000565017 355 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 AL365503.1-201ENST00000605247 905 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AL034351.1-201ENST00000605288 668 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 RMST_8.1-201ENST00000610287 165 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AC093783.1-201ENST00000612976 329 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 AL357559.1-201ENST00000622228 274 ntBASIC3.86□□□□□ -1.79
LRRC53A6NM62 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.86□□□□□ -1.79
LRRC53A6NM62 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LRRC53A6NM62 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LRRC53A6NM62 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 ELL2P3-201ENST00000457883 1602 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 RNU4-40P-201ENST00000364351 143 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 RPL32P23-201ENST00000397237 405 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 RPS3AP26-201ENST00000398259 784 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 RN7SKP156-201ENST00000410308 342 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC109780.2-201ENST00000413467 845 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 MED14P1-201ENST00000430517 648 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 RPS29P7-201ENST00000439662 171 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL122001.1-201ENST00000457027 370 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC021678.1-201ENST00000505195 936 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 OR5BM1P-201ENST00000512021 366 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC026402.1-201ENST00000513642 170 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 NDUFB9P3-201ENST00000521269 501 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC026333.2-201ENST00000542164 106 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 OR8R1P-201ENST00000543943 764 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 AL121603.1-201ENST00000553815 142 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRRC53A6NM62 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC087481.2-201ENST00000565492 330 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 AC006270.2-201ENST00000578523 652 ntBASIC3.85□□□□□ -1.79
LRRC53A6NM62 MIR4286-201ENST00000580651 93 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms