Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 AL513175.2-201ENST00000422071 443 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 RPL7P37-201ENST00000425095 738 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 SEC63P1-201ENST00000425785 1258 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 AL353597.2-202ENST00000434901 373 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 RNA5SP76-201ENST00000516277 87 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 snoZ278.1-201ENST00000517059 112 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 AL159169.2-201ENST00000610061 1269 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 AC245100.2-201ENST00000454544 1679 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 AC009237.8-201ENST00000445492 379 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 RNA5SP182-201ENST00000516064 82 ntBASIC1.95□□□□□ -2.1
CNOT1A5YKK6 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.95□□□□□ -2.1
CNOT1A5YKK6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AL354719.1-201ENST00000406535 843 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 RNA5SP38-201ENST00000410750 119 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 TPMTP3-201ENST00000411928 735 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 TOMM22P6-201ENST00000465035 409 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 RAD1P1-201ENST00000231383 813 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 SNORA31-201ENST00000362607 130 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 MIR598-201ENST00000384868 97 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AL590004.2-201ENST00000404787 371 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 RNU7-95P-201ENST00000459222 64 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 RN7SL297P-201ENST00000483161 293 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 POU5F1P7-201ENST00000508759 541 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC012182.1-201ENST00000570133 895 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC006254.3-201ENST00000603353 884 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AC244517.12-201ENST00000623581 663 ntBASIC1.94□□□□□ -2.1
CNOT1A5YKK6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC008264.2-201ENST00000610193 3731 ntBASIC1.93□□□□□ -2.1
CNOT1A5YKK6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 SDCBPP3-201ENST00000419629 891 ntBASIC1.93□□□□□ -2.1
CNOT1A5YKK6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 HSPE1P28-201ENST00000443139 211 ntBASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AL645939.1-201ENST00000453429 797 ntBASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC004263.1-201ENST00000479327 332 ntBASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC012531.5-201ENST00000611375 151 ntBASIC1.93□□□□□ -2.1
CNOT1A5YKK6 MIR6734-201ENST00000621166 68 ntBASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CNOT1A5YKK6 AC022336.2-201ENST00000568966 2538 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AL445685.2-201ENST00000422551 342 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AC093151.1-201ENST00000427711 313 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 OR4K11P-201ENST00000431829 904 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AC008526.1-201ENST00000509149 338 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.92□□□□□ -2.1
CNOT1A5YKK6 MTND5P21-201ENST00000531961 522 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.92□□□□□ -2.1
CNOT1A5YKK6 MIR6733-201ENST00000635723 61 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AL021368.2-201ENST00000606125 5352 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.92□□□□□ -2.1
CNOT1A5YKK6 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CNOT1A5YKK6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
CNOT1A5YKK6 RNU6-1032P-201ENST00000384100 107 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 RNU6-146P-201ENST00000384602 108 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AC012498.1-201ENST00000424037 437 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 USP9YP7-201ENST00000436723 430 ntBASIC1.92□□□□□ -2.1
CNOT1A5YKK6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms