Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MAPK10-320ENST00000641462 6696 ntBASIC3.38□□□□□ -1.87
IGHV4-28A0A0C4DH34 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
IGHV4-28A0A0C4DH34 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.38□□□□□ -1.87
IGHV4-28A0A0C4DH34 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL445487.1-201ENST00000415694 1580 ntBASIC3.38□□□□□ -1.87
IGHV4-28A0A0C4DH34 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
IGHV4-28A0A0C4DH34 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.38□□□□□ -1.87
IGHV4-28A0A0C4DH34 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 DDX10P1-201ENST00000448545 1933 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 ZNF137P-201ENST00000456718 1920 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 OR52B1P-201ENST00000316506 909 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU6-223P-201ENST00000362830 107 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNA5SP443-201ENST00000363083 132 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 UBBP2-201ENST00000376781 231 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNA5SP332-201ENST00000391063 115 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AP000580.1-201ENST00000404439 358 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 Y_RNA.625-201ENST00000411256 107 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 ZNF90P2-204ENST00000419323 1075 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 MED13P1-201ENST00000428342 171 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC004866.2-201ENST00000438285 481 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 SEPT14P3-201ENST00000439401 183 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC016691.1-201ENST00000441321 413 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL732372.2-207ENST00000445840 183 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 RPS11P1-201ENST00000451072 473 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 SEPT14P2-201ENST00000453405 183 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL445433.1-201ENST00000457507 257 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC008481.1-201ENST00000463278 396 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 RN7SL459P-201ENST00000481078 302 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 RPS29P25-201ENST00000481709 171 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC233702.1-201ENST00000482905 502 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 RPL36AP41-201ENST00000493820 306 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC026427.2-201ENST00000506228 536 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 SEPT14P4-201ENST00000513445 186 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU6-835P-201ENST00000516974 104 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 FO082796.1-201ENST00000523795 183 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AP001646.1-201ENST00000527936 915 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 FKBP1BP1-201ENST00000553366 325 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 HIF1AP1-201ENST00000553642 175 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC090616.5-202ENST00000582111 297 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 U3.53-201ENST00000628922 216 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
IGHV4-28A0A0C4DH34 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL359922.3-201ENST00000624779 1670 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 SNORA72.1-201ENST00000363485 129 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU6-1279P-201ENST00000383917 103 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU6-1074P-201ENST00000383995 104 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU6-629P-201ENST00000384061 103 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU6-882P-201ENST00000391025 103 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC138393.2-201ENST00000414742 246 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC099677.1-201ENST00000420575 175 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC244098.2-201ENST00000422068 99 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 EIF4HP2-201ENST00000424380 563 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC079780.1-201ENST00000428259 207 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 DNAJC19P7-201ENST00000428811 344 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 MTATP6P16-201ENST00000434543 526 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL121871.1-201ENST00000443413 436 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 H2AFZP6-201ENST00000444403 394 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU6-261P-201ENST00000459506 102 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNA5SP401-201ENST00000515920 127 ntBASIC3.36□□□□□ -1.87
IGHV4-28A0A0C4DH34 RN7SKP92-201ENST00000517266 244 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms