Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 OR10V3P-201ENST00000525712 725 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AP000857.1-201ENST00000532151 543 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 SNRPGP16-201ENST00000533275 226 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC018630.1-201ENST00000541376 925 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC025918.2-201ENST00000558683 763 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC090695.1-201ENST00000561269 1222 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AP005205.1-201ENST00000563503 508 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC027104.1-201ENST00000563702 681 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 MIR4635-201ENST00000583759 79 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC012254.4-201ENST00000588843 273 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC023043.3-201ENST00000593113 385 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 VN1R90P-201ENST00000595717 726 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 VN1R92P-201ENST00000598511 928 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL035413.2-201ENST00000604801 525 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL137843.1-201ENST00000605078 385 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AL033523.1-201ENST00000605153 153 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC244517.1-201ENST00000606030 2086 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 AC006378.2-201ENST00000623178 2476 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 Z82195.2-201ENST00000612348 18351 ntBASIC2.11□□□□□ -2.07
TRAV41A0A0B4J266 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 RNA5SP27-201ENST00000363839 119 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-796P-201ENST00000391086 107 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AL158825.1-201ENST00000414735 521 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC099677.1-201ENST00000420575 175 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC063976.3-201ENST00000426849 329 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 TRIM60P13-201ENST00000432350 1283 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 MTND3P4-201ENST00000453537 303 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 SNORD109B-201ENST00000458961 67 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 SNORD109A-201ENST00000459128 67 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC008571.1-201ENST00000467232 300 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC090525.1-201ENST00000479116 478 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 RNA5SP76-201ENST00000516277 87 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC103833.1-201ENST00000517442 172 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AP001804.3-201ENST00000525146 880 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC128657.1-201ENST00000549459 145 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC004217.3-201ENST00000551552 878 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 MTCO3P13-201ENST00000577757 781 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC090666.1-201ENST00000578241 445 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AP001330.4-201ENST00000604350 154 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 OR2AS2P-201ENST00000606902 342 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AC245100.7-201ENST00000609678 442 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 AL590396.2-201ENST00000636511 1041 ntBASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRAV41A0A0B4J266 MTCO1P18-201ENST00000455518 1419 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-1339P-201ENST00000363574 91 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 MIR181B1-201ENST00000385240 110 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-821P-201ENST00000390995 107 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AL122016.1-201ENST00000403365 367 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 BX682237.1-201ENST00000415016 335 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AC019097.1-201ENST00000424783 735 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 ARL5AP4-201ENST00000430731 512 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AC005002.1-201ENST00000447458 540 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 AC004022.1-201ENST00000447766 1066 ntBASIC2.09□□□□□ -2.07
TRAV41A0A0B4J266 MTND5P8-201ENST00000449817 1083 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms