Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AP000936.2-201ENST00000447151 681 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 CACYBPP2-201ENST00000453625 678 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 C1DP3-201ENST00000455013 423 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 SETP11-201ENST00000473027 690 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 VN1R104P-201ENST00000505115 1009 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 RN7SKP132-201ENST00000516001 208 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AC087241.2-201ENST00000535801 324 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 NOP56P3-201ENST00000549457 385 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AC087481.2-201ENST00000565492 330 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 VN1R90P-201ENST00000595717 726 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 VN1R92P-201ENST00000598511 928 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 HMGB1P51-201ENST00000605166 638 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AL160281.1-201ENST00000605307 311 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 NF1P10-201ENST00000613227 742 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AL360181.4-201ENST00000621752 134 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 AC092608.2-201ENST00000624427 218 ntBASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DRB4X5D2U9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 MTND5P28-201ENST00000438005 1594 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 SNORA80A-201ENST00000363922 136 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 SNORA67.1-201ENST00000364749 141 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 U3.37-201ENST00000408528 213 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 ARL5AP4-201ENST00000430731 512 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AL513175.1-201ENST00000431492 780 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 ARL5AP3-201ENST00000439327 386 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AL831737.1-201ENST00000441288 271 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC096576.1-201ENST00000489014 359 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC111193.1-201ENST00000504097 155 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC243972.3-201ENST00000539655 198 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 ACTR3BP3-201ENST00000565577 979 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 MYL12BP1-201ENST00000569826 507 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 XIAPP1-201ENST00000603162 600 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AL033523.1-201ENST00000605153 153 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 OR2AS2P-201ENST00000606902 342 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AL355810.1-201ENST00000614629 552 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 AC110079.1-202ENST00000635213 138 ntBASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DRB4X5D2U9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 U8.8-201ENST00000365399 135 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 SET-203ENST00000372688 801 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 Y_RNA.493-201ENST00000384422 102 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 MIR34A-201ENST00000385130 110 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 MT-TC-201ENST00000387405 66 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 RNA5SP56-201ENST00000410277 118 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 RNA5SP184-201ENST00000411071 108 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC073264.1-201ENST00000411508 416 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC080125.1-201ENST00000414888 684 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 USP9YP20-201ENST00000419224 558 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC091390.3-201ENST00000426478 338 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 RPL23AP15-201ENST00000450202 459 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 RPL23AP70-201ENST00000483361 460 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 CCNHP1-201ENST00000513311 678 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 RNA5SP356-201ENST00000515972 94 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 RNA5SP82-201ENST00000516707 92 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC087808.1-201ENST00000520501 361 ntBASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.9□□□□□ -2.11
HLA-DRB4X5D2U9 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms