Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC4.55□□□□□ -1.68
U3KQE9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
U3KQE9 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
U3KQE9 DDX18P3-201ENST00000404856 2007 ntBASIC4.55□□□□□ -1.68
U3KQE9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
U3KQE9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
U3KQE9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.54□□□□□ -1.68
U3KQE9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.54□□□□□ -1.68
U3KQE9 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 BTBD10P1-201ENST00000549824 1352 ntBASIC4.54□□□□□ -1.68
U3KQE9 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
U3KQE9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.54□□□□□ -1.68
U3KQE9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.54□□□□□ -1.68
U3KQE9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
U3KQE9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
U3KQE9 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC4.54□□□□□ -1.68
U3KQE9 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 Y_RNA.291-201ENST00000364886 113 ntBASIC4.54□□□□□ -1.68
U3KQE9 RNU6-48P-201ENST00000384161 107 ntBASIC4.54□□□□□ -1.68
U3KQE9 AL513475.1-201ENST00000406602 315 ntBASIC4.54□□□□□ -1.68
U3KQE9 RNA5SP36-201ENST00000410197 133 ntBASIC4.54□□□□□ -1.68
U3KQE9 RNU6-325P-201ENST00000411132 105 ntBASIC4.54□□□□□ -1.68
U3KQE9 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.54□□□□□ -1.68
U3KQE9 AL590399.2-201ENST00000427536 309 ntBASIC4.54□□□□□ -1.68
U3KQE9 CYCSP12-201ENST00000437729 300 ntBASIC4.54□□□□□ -1.68
U3KQE9 RPS12P17-201ENST00000438591 377 ntBASIC4.54□□□□□ -1.68
U3KQE9 RPL5P7-201ENST00000444235 813 ntBASIC4.54□□□□□ -1.68
U3KQE9 AC097463.1-201ENST00000447288 481 ntBASIC4.54□□□□□ -1.68
U3KQE9 AC092647.2-201ENST00000452998 253 ntBASIC4.54□□□□□ -1.68
U3KQE9 RPL10P17-201ENST00000453852 316 ntBASIC4.54□□□□□ -1.68
U3KQE9 AL139109.1-201ENST00000455491 297 ntBASIC4.54□□□□□ -1.68
U3KQE9 RNU7-169P-201ENST00000459456 61 ntBASIC4.54□□□□□ -1.68
U3KQE9 AC092865.4-201ENST00000477936 615 ntBASIC4.54□□□□□ -1.68
U3KQE9 RPS27AP13-201ENST00000498403 237 ntBASIC4.54□□□□□ -1.68
U3KQE9 AC113367.2-201ENST00000505749 160 ntBASIC4.54□□□□□ -1.68
U3KQE9 AC113155.1-201ENST00000511141 769 ntBASIC4.54□□□□□ -1.68
U3KQE9 RNA5SP441-201ENST00000516809 88 ntBASIC4.54□□□□□ -1.68
U3KQE9 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.54□□□□□ -1.68
U3KQE9 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.54□□□□□ -1.68
U3KQE9 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.54□□□□□ -1.68
U3KQE9 OR4H12P-201ENST00000556269 907 ntBASIC4.54□□□□□ -1.68
U3KQE9 AC068768.2-201ENST00000602352 343 ntBASIC4.54□□□□□ -1.68
U3KQE9 AP000787.2-201ENST00000604432 568 ntBASIC4.54□□□□□ -1.68
U3KQE9 MIR15A-201ENST00000607334 83 ntBASIC4.54□□□□□ -1.68
U3KQE9 FAM27E2-201ENST00000619668 403 ntBASIC4.54□□□□□ -1.68
U3KQE9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 MIR4496-201ENST00000635896 61 ntBASIC4.54□□□□□ -1.68
U3KQE9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
U3KQE9 MFSD8-239ENST00000641590 2479 ntBASIC4.54□□□□□ -1.68
U3KQE9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.54□□□□□ -1.68
U3KQE9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.54□□□□□ -1.68
U3KQE9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.54□□□□□ -1.68
U3KQE9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.54□□□□□ -1.68
U3KQE9 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
U3KQE9 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
U3KQE9 AC005332.5-201ENST00000591222 2919 ntBASIC4.53□□□□□ -1.68
U3KQE9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.53□□□□□ -1.68
U3KQE9 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
U3KQE9 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
U3KQE9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.53□□□□□ -1.68
U3KQE9 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.53□□□□□ -1.68
U3KQE9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
U3KQE9 Y_RNA.27-201ENST00000362540 103 ntBASIC4.53□□□□□ -1.68
U3KQE9 RNU6-545P-201ENST00000362681 104 ntBASIC4.53□□□□□ -1.68
U3KQE9 Y_RNA.200-201ENST00000364018 102 ntBASIC4.53□□□□□ -1.68
U3KQE9 RNY3P11-201ENST00000364153 102 ntBASIC4.53□□□□□ -1.68
U3KQE9 Y_RNA.274-201ENST00000364714 101 ntBASIC4.53□□□□□ -1.68
U3KQE9 U8.8-201ENST00000365399 135 ntBASIC4.53□□□□□ -1.68
U3KQE9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.53□□□□□ -1.68
U3KQE9 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
U3KQE9 MRPL35P1-201ENST00000404272 572 ntBASIC4.53□□□□□ -1.68
U3KQE9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.53□□□□□ -1.68
U3KQE9 RN7SKP86-201ENST00000410454 332 ntBASIC4.53□□□□□ -1.68
U3KQE9 AL353621.1-201ENST00000418219 243 ntBASIC4.53□□□□□ -1.68
U3KQE9 AL391219.1-201ENST00000422570 483 ntBASIC4.53□□□□□ -1.68
U3KQE9 REREP1Y-201ENST00000422655 198 ntBASIC4.53□□□□□ -1.68
U3KQE9 AC008065.1-201ENST00000428525 348 ntBASIC4.53□□□□□ -1.68
U3KQE9 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms