Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 Y_RNA.19-201ENST00000362462 99 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 SNORA51.9-201ENST00000384295 124 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 SNORA19-201ENST00000384737 128 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 SNORD73A-201ENST00000386062 65 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 ENSAP1-201ENST00000392855 326 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 SNORA11.5-201ENST00000408163 128 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC108032.1-201ENST00000416706 207 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 SYF2P2-201ENST00000417620 583 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC099677.1-201ENST00000420575 175 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 RPL21P91-201ENST00000429231 479 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 AL132765.1-201ENST00000434165 553 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 PNKDP1-201ENST00000435914 430 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC073910.1-201ENST00000445047 438 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 BX276092.4-201ENST00000452056 248 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 RPL10P17-201ENST00000453852 316 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 RPL23AP31-201ENST00000456160 467 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 RNU7-138P-201ENST00000459479 64 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 RN7SL168P-201ENST00000463821 279 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC104339.1-201ENST00000465478 348 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC012158.1-204ENST00000483430 465 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC069499.1-201ENST00000489433 509 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC007991.1-201ENST00000522680 631 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 OR1F2P-201ENST00000570470 933 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 RNU6-85P-201ENST00000605989 107 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AL133481.2-203ENST00000607558 139 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC092266.1-201ENST00000610958 165 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 AC073488.3-201ENST00000631611 778 ntBASIC5.49□□□□□ -1.53
GPC6Q9Y625 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.49□□□□□ -1.53
GPC6Q9Y625 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GPC6Q9Y625 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GPC6Q9Y625 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GPC6Q9Y625 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 AL157777.2-201ENST00000258070 137 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AL445529.1-201ENST00000398713 389 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 RNU6-603P-201ENST00000411403 107 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 RPL12P34-201ENST00000424532 479 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 PIGPP3-201ENST00000425307 415 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AL645568.3-201ENST00000433683 316 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 RPS12P17-201ENST00000438591 377 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC105399.1-202ENST00000447303 205 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 RPS3AP46-201ENST00000448352 682 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 RN7SL197P-201ENST00000466981 299 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC098847.1-201ENST00000473094 348 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 RN7SL741P-201ENST00000482473 289 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 SNORA25.11-201ENST00000515935 105 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 SNORA40.14-201ENST00000516543 86 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 MIR2117-201ENST00000516780 80 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC103783.1-201ENST00000520506 373 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AP006587.4-201ENST00000526053 529 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 AP003385.6-201ENST00000531603 374 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 MIR4271-201ENST00000582451 67 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC068768.2-201ENST00000602352 343 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC104687.2-201ENST00000604442 342 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AC015982.1-201ENST00000608113 465 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 AL161616.1-201ENST00000611867 286 ntBASIC5.48□□□□□ -1.53
GPC6Q9Y625 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
GPC6Q9Y625 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GPC6Q9Y625 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
GPC6Q9Y625 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GPC6Q9Y625 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GPC6Q9Y625 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms