Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AP004247.3-201ENST00000608682 624 ntBASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 AL355810.1-201ENST00000614629 552 ntBASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 AC073968.1-201ENST00000618594 637 ntBASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 AL360181.4-201ENST00000621752 134 ntBASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 AC091953.5-201ENST00000622919 233 ntBASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 CR381653.2-201ENST00000624041 768 ntBASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 AL121594.5-201ENST00000631724 573 ntBASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HHLA3Q9XRX5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HHLA3Q9XRX5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HHLA3Q9XRX5 AC096644.4-201ENST00000563417 2912 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 MFSD8-213ENST00000641134 1327 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC233263.6-201ENST00000631132 1963 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 MIR208A-201ENST00000362287 71 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 RNU6-883P-201ENST00000384597 107 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 RNU6-821P-201ENST00000390995 107 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 FO393413.1-201ENST00000402892 195 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 RNU6-712P-201ENST00000410558 100 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 RPL7P8-201ENST00000411964 730 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 EEF1A1P41-201ENST00000414667 207 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 SNRPEP4-201ENST00000435815 279 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 LSM1P1-201ENST00000438629 273 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AL691517.1-201ENST00000440833 1235 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AL929288.2-201ENST00000446368 407 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 SNORA31.1-201ENST00000515993 133 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 SNORA31.5-201ENST00000516190 133 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC095057.3-201ENST00000567102 1157 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AP001330.4-201ENST00000604350 154 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC005046.1-201ENST00000608515 625 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 RMST_10.1-201ENST00000616309 154 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC068722.2-201ENST00000618734 544 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC006111.3-201ENST00000622137 383 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC091564.4-201ENST00000533934 2194 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 SGO1P2-201ENST00000429458 1589 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC244517.1-201ENST00000606030 2086 ntBASIC2.02□□□□□ -2.09
HHLA3Q9XRX5 AC130650.2-201ENST00000618736 2403 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 MTCO1P6-201ENST00000481192 1384 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC111188.2-201ENST00000529697 1387 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 RNA5SP387-201ENST00000364226 106 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 Y_RNA.333-201ENST00000365274 102 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 CD24P4-201ENST00000382840 243 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 SNORA48.5-201ENST00000391143 135 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 RNA5SP38-201ENST00000410750 119 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 RNU2-25P-201ENST00000411041 191 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC233981.1-201ENST00000423224 461 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 CR769767.1-201ENST00000436337 346 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 RNFT1P2-201ENST00000443064 757 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC005002.1-201ENST00000447458 540 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC004022.1-201ENST00000447766 1066 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 NIPA2P5-201ENST00000452282 464 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 HMGN3P1-201ENST00000453847 193 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 S100A11P2-201ENST00000467589 312 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC009901.1-201ENST00000506703 541 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 SNORA31.8-201ENST00000516327 108 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AP000790.1-201ENST00000528891 737 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 SNRPGP16-201ENST00000533275 226 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 GTF2IP8-201ENST00000560687 584 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC106734.1-201ENST00000568646 663 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC074051.3-201ENST00000570238 358 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC060766.3-201ENST00000591442 263 ntBASIC2.01□□□□□ -2.09
HHLA3Q9XRX5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms