Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RN7SL290P-201ENST00000578661 300 ntBASIC6.81□□□□□ -1.32
PDZRN3Q9UPQ7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.81□□□□□ -1.32
PDZRN3Q9UPQ7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDZRN3Q9UPQ7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDZRN3Q9UPQ7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDZRN3Q9UPQ7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
PDZRN3Q9UPQ7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PDZRN3Q9UPQ7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
PDZRN3Q9UPQ7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AC025125.1-201ENST00000624743 1922 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 Y_RNA.83-201ENST00000363005 113 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 RNU6-1078P-201ENST00000364522 103 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 Y_RNA.269-201ENST00000364685 89 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 RNA5SP241-201ENST00000391326 114 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 TRAPPC2P10-201ENST00000415662 323 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AL035461.1-201ENST00000421490 332 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 RPS20P5-201ENST00000434808 360 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 NUTF2P3-201ENST00000448540 384 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AL049714.1-201ENST00000466686 347 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 MTND5P41-201ENST00000517498 206 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AP003733.2-201ENST00000529409 171 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 EDDM3DP-201ENST00000554692 434 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AL353796.1-201ENST00000561542 3241 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AC005341.1-201ENST00000571086 708 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 AP001282.2-201ENST00000616149 309 ntBASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
PDZRN3Q9UPQ7 MAPK10-328ENST00000641553 4009 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 COX6CP10-201ENST00000416832 224 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 GSTM5P1-201ENST00000434751 660 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 RPL31P44-201ENST00000447680 377 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 TPT1P12-201ENST00000448968 492 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 RPS29P15-201ENST00000458329 171 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 FTH1P2-201ENST00000466086 412 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 AC108860.1-201ENST00000484521 383 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 RNA5SP337-201ENST00000517007 109 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 GSTP1P1-201ENST00000548078 319 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 MIR4330-201ENST00000579077 105 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 AL138726.1-201ENST00000614873 333 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 CR381572.1-201ENST00000625098 102 ntBASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.79□□□□□ -1.32
PDZRN3Q9UPQ7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC004158.1-201ENST00000564508 4319 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 Y_RNA.551-201ENST00000384661 102 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 MIR454-201ENST00000390180 115 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AL078599.1-201ENST00000402075 293 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AP000580.1-201ENST00000404439 358 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 RNU6-55P-201ENST00000411092 107 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 RPL7AP49-201ENST00000429522 581 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AL591438.1-201ENST00000433508 581 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 RPL29P29-201ENST00000448725 423 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 MTCO3P8-201ENST00000453691 755 ntBASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.78□□□□□ -1.32
PDZRN3Q9UPQ7 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms