Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC107294.1-201ENST00000609524 467 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL592295.2-201ENST00000612578 206 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC046144.1-201ENST00000478559 1853 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AP001642.1-201ENST00000624727 2117 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RNA5SP432-201ENST00000362480 116 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RNU6-1066P-201ENST00000363573 105 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 U3.23-201ENST00000391132 200 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RN7SL429P-201ENST00000479090 223 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL163540.1-201ENST00000485382 386 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RN7SL489P-201ENST00000486185 223 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RN7SL327P-201ENST00000488659 223 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC090096.1-201ENST00000489168 390 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RPL39P36-201ENST00000490784 156 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC107222.1-201ENST00000510899 637 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC105914.1-201ENST00000511798 226 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 IGHV3-32-201ENST00000519182 355 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RPL23AP97-201ENST00000568955 471 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC243960.4-201ENST00000600532 288 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL355472.4-201ENST00000610233 626 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AC243654.2-201ENST00000612843 443 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 RN7SL853P-201ENST00000617250 223 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 AL158801.5-201ENST00000623123 465 ntBASIC6.22□□□□□ -1.41
COL17A1Q9UMD9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
COL17A1Q9UMD9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
COL17A1Q9UMD9 GVINP1-202ENST00000531871 7271 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 RIOK3P1-201ENST00000418778 1528 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 RNA5SP307-201ENST00000362863 116 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 RNU6-1026P-201ENST00000384465 108 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 RNU6-878P-201ENST00000384578 110 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 VN1R8P-201ENST00000407739 893 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 ZNF90P2-204ENST00000419323 1075 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AL365184.2-201ENST00000431139 435 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 RPL23AP46-201ENST00000438548 490 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC244505.5-201ENST00000443639 207 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 SNRPGP6-201ENST00000451124 220 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 U8.20-201ENST00000459445 131 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 MTCO2P29-201ENST00000465212 189 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 Y_RNA.720-201ENST00000517166 92 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC006064.5-201ENST00000541782 248 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC007424.1-203ENST00000554613 687 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 MIR3913-1-201ENST00000577744 102 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 MIR3936-201ENST00000584304 110 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 MIR5684-201ENST00000585074 65 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 RNU6-88P-201ENST00000606801 100 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC024560.3-201ENST00000608482 349 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 MIR1321-201ENST00000637766 79 ntBASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
COL17A1Q9UMD9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AC117529.2-201ENST00000512159 2068 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 MIR369-201ENST00000362155 70 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 RNU6-1062P-201ENST00000383908 107 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 AL139247.1-201ENST00000422768 325 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 TIMM9P3-201ENST00000428659 274 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 MTCYBP9-201ENST00000431021 303 ntBASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC6.2□□□□□ -1.42
COL17A1Q9UMD9 CEACAMP1-201ENST00000434624 1035 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms