Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 VN1R34P-201ENST00000447387 883 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 RBMY2UP-201ENST00000453474 324 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 TMEM251P1-201ENST00000503717 318 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC110792.2-201ENST00000510278 224 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 OR5B10P-201ENST00000532869 642 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC141257.3-201ENST00000572906 215 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC099489.2-201ENST00000574976 260 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 MIR4637-201ENST00000582405 84 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AP001004.1-201ENST00000582468 324 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC067852.4-201ENST00000590314 478 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC006116.10-201ENST00000591836 581 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC010680.4-201ENST00000605334 543 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC010678.1-201ENST00000614118 713 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 uc_338.32-201ENST00000615087 172 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 MIR6864-201ENST00000617935 70 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC009509.4-201ENST00000619202 509 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC026585.1-201ENST00000619582 524 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC243312.2-201ENST00000623340 601 ntBASIC3.82□□□□□ -1.8
SIX4Q9UIU6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.82□□□□□ -1.8
SIX4Q9UIU6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 RNA5SP119-201ENST00000362715 117 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 Y_RNA.359-201ENST00000365498 102 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 MIR23B-201ENST00000384832 97 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 ARF4P3-201ENST00000397387 509 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 EIF5P1-201ENST00000400019 1231 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 DHFRP6-201ENST00000401776 268 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL391417.1-201ENST00000404100 426 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL023807.1-201ENST00000407932 359 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 MTCO3P41-201ENST00000414801 328 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC083875.1-201ENST00000419509 405 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 CYP4F29P-201ENST00000420685 446 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 FTH1P6-201ENST00000430768 320 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 CYCSP43-201ENST00000438233 310 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 PPIAP3-201ENST00000450588 505 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 U3.44-201ENST00000458938 192 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC079140.3-201ENST00000511111 550 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC104986.1-201ENST00000517978 436 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 ZNF705CP-201ENST00000530515 889 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC103843.2-201ENST00000530523 682 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 PCMTD1P2-201ENST00000565017 355 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 MAGOH2P-202ENST00000584384 429 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 MIR548AB-201ENST00000584917 84 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC012065.4-201ENST00000602445 679 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL357559.1-201ENST00000622228 274 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL359715.5-201ENST00000623431 443 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC025048.6-202ENST00000627667 438 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AL392088.2-201ENST00000637607 285 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 U6.101-201ENST00000637707 76 ntBASIC3.81□□□□□ -1.8
SIX4Q9UIU6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SIX4Q9UIU6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX4Q9UIU6 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms