Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.16□□□□□ -1.42
LIMD1Q9UGP4 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMD1Q9UGP4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMD1Q9UGP4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
LIMD1Q9UGP4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
LIMD1Q9UGP4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 OR10R3P-201ENST00000361688 942 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 Y_RNA.518-201ENST00000384552 113 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 SAR1AP2-201ENST00000392696 594 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 RNU6-607P-201ENST00000411283 108 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 RPL7AP73-201ENST00000413490 353 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 RPS15AP34-201ENST00000487776 387 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AC007686.1-201ENST00000488511 463 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 RNA5SP228-201ENST00000516232 133 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 CBX3P8-201ENST00000532412 525 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 RPS29P30-201ENST00000600975 111 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AL138960.1-201ENST00000613838 513 ntBASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.15□□□□□ -1.42
LIMD1Q9UGP4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
LIMD1Q9UGP4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.15□□□□□ -1.43
LIMD1Q9UGP4 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.15□□□□□ -1.43
LIMD1Q9UGP4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
LIMD1Q9UGP4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.15□□□□□ -1.43
LIMD1Q9UGP4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
LIMD1Q9UGP4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 RNU6-249P-201ENST00000363016 102 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 SNORA51.11-201ENST00000384442 131 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 RNU6-1093P-201ENST00000391194 107 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 UBE2D3P2-201ENST00000424409 445 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AC105399.1-202ENST00000447303 205 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 RPS3AP46-201ENST00000448352 682 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 RN7SL547P-201ENST00000490793 290 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 RNU6-911P-201ENST00000516523 104 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 Y_RNA.687-201ENST00000516558 91 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 SNRPGP16-201ENST00000533275 226 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 OR4H6P-201ENST00000563771 921 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AL512605.2-201ENST00000592972 256 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AL390123.1-201ENST00000603216 237 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 RAC1P9-201ENST00000604990 392 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AC130454.1-201ENST00000622948 401 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 FP236240.3-201ENST00000623061 327 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 AP000547.3-204ENST00000588548 2523 ntBASIC6.14□□□□□ -1.43
LIMD1Q9UGP4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 AC110373.1-201ENST00000505994 3505 ntBASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 PABPC1P6-201ENST00000445594 1829 ntBASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.13□□□□□ -1.43
LIMD1Q9UGP4 Y_RNA.19-201ENST00000362462 99 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms