Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC106785.1-201ENST00000565935 262 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AL391840.1-201ENST00000571144 367 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC104458.1-201ENST00000608243 463 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC103858.2-201ENST00000621471 543 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AL359880.1-201ENST00000621879 266 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AC005086.4-201ENST00000623065 213 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 AL122126.1-201ENST00000546905 1318 ntBASIC4.38□□□□□ -1.71
DKK3Q9UBP4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
DKK3Q9UBP4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 U8.3-201ENST00000363321 132 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 RNY4P14-201ENST00000363656 96 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 RNA5SP175-201ENST00000364275 119 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 RNU1-132P-201ENST00000364300 164 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 Y_RNA.303-201ENST00000364998 94 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 MTCO3P40-201ENST00000392516 676 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 FGF7P8-201ENST00000402994 292 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 SNORA11.1-201ENST00000408133 129 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 MTCO1P17-201ENST00000411522 491 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC104563.1-201ENST00000476147 376 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 RN7SL691P-201ENST00000494487 301 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC005726.1-201ENST00000494679 427 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AP002812.1-201ENST00000495378 474 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 NDUFB4P9-201ENST00000511646 388 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 SAP18P1-201ENST00000512058 390 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 MTCO1P35-201ENST00000515270 228 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AP000889.1-201ENST00000530968 660 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AP003122.4-201ENST00000530980 758 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC012417.1-201ENST00000582307 1039 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC006504.3-201ENST00000586818 523 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AL160290.3-201ENST00000604869 165 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 Z98200.1-201ENST00000607298 470 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 MIR3653-201ENST00000625572 110 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 MIR6863-201ENST00000636112 90 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 CR848007.1-201ENST00000442354 1699 ntBASIC4.37□□□□□ -1.71
DKK3Q9UBP4 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DKK3Q9UBP4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 MTND5P28-201ENST00000438005 1594 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AL158163.1-201ENST00000603915 1649 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 RNU6-1103P-201ENST00000384150 107 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 RPS3AP24-201ENST00000407896 734 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 RPL23AP26-201ENST00000412728 464 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 PIGFP2-201ENST00000421400 651 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 EIF1P3-201ENST00000423841 334 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AL121601.2-201ENST00000438019 707 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AP000873.1-201ENST00000463987 400 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 UQCRHP4-201ENST00000471686 272 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC087879.1-201ENST00000474343 374 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC019235.1-201ENST00000503847 207 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.36□□□□□ -1.71
DKK3Q9UBP4 AC010342.1-201ENST00000514047 877 ntBASIC4.36□□□□□ -1.71
DKK3Q9UBP4 RNA5SP73-201ENST00000516744 108 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms