Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SRIP2-201ENST00000428470 166 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AL365400.1-201ENST00000431854 640 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC004938.1-201ENST00000438468 308 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 Z95327.1-201ENST00000446082 482 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC105417.1-201ENST00000514691 285 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 PTP4A1P6-201ENST00000531034 478 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 OR8L1P-201ENST00000534005 955 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 FKBP1BP1-201ENST00000553366 325 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AL442663.2-201ENST00000554385 511 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC087477.6-201ENST00000559595 843 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC067852.4-201ENST00000590314 478 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 GLUD1P4-201ENST00000590914 418 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC025588.3-201ENST00000604182 274 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AC245517.5-201ENST00000611529 162 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 Mico1.1-201ENST00000611698 204 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 LINC00901.1-201ENST00000617252 152 ntBASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PPARGC1AQ9UBK2 AL157700.1-201ENST00000561973 1432 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 OR14L1P-202ENST00000641545 3009 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 RIOK3P1-201ENST00000418778 1528 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC006026.1-201ENST00000444025 1803 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 RPL7P26-201ENST00000333817 754 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 HSPE1P11-201ENST00000339579 310 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 RNVU1-3-201ENST00000364313 161 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 SNORD81.2-201ENST00000365153 76 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 RNU6-996P-201ENST00000365438 107 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 RNY3P13-201ENST00000365542 102 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC009161.1-201ENST00000417306 376 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC127526.1-201ENST00000417526 366 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 PDCL2P1-201ENST00000419302 352 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 NCOR1P3-201ENST00000420479 303 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC008065.1-201ENST00000428525 348 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL049745.1-201ENST00000433953 286 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 FTH1P1-201ENST00000437933 532 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC016831.4-201ENST00000438302 307 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL772161.1-201ENST00000439130 476 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL049714.1-201ENST00000466686 347 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL163973.1-201ENST00000484753 577 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 NIPA2P2-201ENST00000496376 1083 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 MTCO3P9-201ENST00000506989 781 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 OR7H2P-201ENST00000513483 306 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 Y_RNA.675-201ENST00000516389 149 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC022690.1-201ENST00000526681 550 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC243972.3-201ENST00000539655 198 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL110118.1-201ENST00000553543 400 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC078795.3-201ENST00000602913 472 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AL354950.2-201ENST00000617939 290 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 AC244100.1-202ENST00000621554 382 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 MIR6715B-201ENST00000637172 77 ntBASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
PPARGC1AQ9UBK2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 SNORD51-201ENST00000384320 80 ntBASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 EEF1A1P40-201ENST00000412883 573 ntBASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 AL591848.1-201ENST00000413092 322 ntBASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 CHIAP3-201ENST00000423668 1133 ntBASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 MED13P1-201ENST00000428342 171 ntBASIC4.88□□□□□ -1.63
PPARGC1AQ9UBK2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms