Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CNTN3Q9P232 Y_RNA.149-201ENST00000363558 117 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 RNU6-1318P-201ENST00000365389 103 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 RNU6-432P-201ENST00000384196 109 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AL109941.1-201ENST00000401925 229 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 MIR548F4-201ENST00000408515 105 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC093162.1-201ENST00000419682 124 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC092162.1-201ENST00000432828 434 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 RPL19P16-201ENST00000433839 588 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC005094.1-201ENST00000440420 368 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 RPS27AP1-201ENST00000475545 471 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 RN7SKP147-201ENST00000517154 244 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC135001.1-201ENST00000544546 283 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC010680.4-201ENST00000605334 543 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC090425.1-201ENST00000610007 140 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 U4.1-201ENST00000620349 87 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC007792.1-201ENST00000623023 402 ntBASIC5.59□□□□□ -1.51
CNTN3Q9P232 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.59□□□□□ -1.51
CNTN3Q9P232 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CNTN3Q9P232 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.59□□□□□ -1.52
CNTN3Q9P232 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.59□□□□□ -1.52
CNTN3Q9P232 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CNTN3Q9P232 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.52
CNTN3Q9P232 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 EXOC5P1-201ENST00000510543 1969 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 OR9K1P-202ENST00000641111 3217 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 MAPK10-304ENST00000641341 3984 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 RNU6-1040P-201ENST00000383974 107 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 SNORD51-201ENST00000384320 80 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 U3.29-201ENST00000391296 212 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 SOD2P1-201ENST00000396543 562 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 MRPL42P3-201ENST00000401492 326 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AL078599.1-201ENST00000402075 293 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 RN7SKP114-201ENST00000410327 279 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 RPS15AP40-201ENST00000419621 391 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 NUP35P1-201ENST00000422734 947 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AC018865.2-201ENST00000423631 129 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 RPL23AP89-201ENST00000439324 255 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AL731563.1-201ENST00000442202 214 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 HMGB3P21-201ENST00000452483 547 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 DHFRP3-201ENST00000455595 559 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AC108161.1-201ENST00000461060 402 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 RPL21P8-201ENST00000465083 535 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 RN7SL97P-201ENST00000486780 299 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AC231760.1-201ENST00000498002 260 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 HIGD1AP13-201ENST00000509878 289 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 SNORA25.10-201ENST00000515926 124 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 MIR4293-201ENST00000584305 78 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 AC093799.2-201ENST00000610062 578 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AL591926.8-201ENST00000616876 211 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AL445363.3-201ENST00000623080 671 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 AP001784.1-201ENST00000624107 428 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CNTN3Q9P232 MAPK10-338ENST00000641647 3362 ntBASIC5.58□□□□□ -1.52
CNTN3Q9P232 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CNTN3Q9P232 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTN3Q9P232 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CNTN3Q9P232 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms