Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC011460.1-201ENST00000636268 1834 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 Y_RNA.126-201ENST00000363382 111 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 MIR607-201ENST00000385241 96 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AL691449.1-201ENST00000426570 421 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AL138799.3-201ENST00000438968 350 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 RAC1P7-201ENST00000445367 377 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AL359073.1-201ENST00000448036 403 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 RPS24P6-201ENST00000452670 400 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AC006517.1-201ENST00000480485 328 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 MIR2114-201ENST00000516645 80 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 RNU6-798P-201ENST00000516912 103 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AC012414.6-201ENST00000568241 401 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 MIR3160-1-201ENST00000577972 85 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 MIR5697-201ENST00000578045 78 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AL022099.1-201ENST00000604551 712 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 HMGB1P50-201ENST00000605814 607 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 OR10AB1P-201ENST00000609613 938 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 MIR6868-201ENST00000611215 58 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AL713922.2-201ENST00000619384 716 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AC112204.3-201ENST00000623822 332 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AP005264.7-201ENST00000625003 745 ntBASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
HCN3Q9P1Z3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.8
HCN3Q9P1Z3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.8
HCN3Q9P1Z3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
HCN3Q9P1Z3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HCN3Q9P1Z3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.84□□□□□ -1.8
HCN3Q9P1Z3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
HCN3Q9P1Z3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 XIAPP3-201ENST00000312918 795 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 SNORA51.2-201ENST00000364595 132 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 RPS20P2-201ENST00000402520 389 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 RNA5SP306-201ENST00000411087 107 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL356583.2-201ENST00000426536 280 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL360221.1-201ENST00000445989 335 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 USP9YP12-201ENST00000450481 570 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 DNAJC19P1-201ENST00000455312 319 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AC007967.1-201ENST00000455422 1159 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 snoU13.4-201ENST00000458916 104 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 RN7SL585P-201ENST00000470538 280 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AC110792.1-201ENST00000491826 472 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AC004069.2-201ENST00000505438 1114 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AC021146.1-201ENST00000511202 716 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AP002748.2-201ENST00000528671 348 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AP000907.2-201ENST00000530827 353 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 OR5D17P-201ENST00000531492 978 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL360157.1-201ENST00000565962 87 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 FAM60BP-201ENST00000578364 658 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 UBE2L4-201ENST00000587688 464 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AC119751.7-201ENST00000600494 245 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AC073544.2-201ENST00000601155 540 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL158801.5-201ENST00000623123 465 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 AL645937.1-201ENST00000641739 1652 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 MARK2P15-201ENST00000432204 2186 ntBASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HCN3Q9P1Z3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HCN3Q9P1Z3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms