Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AL109659.3-201ENST00000624985 950 ntBASIC3.37□□□□□ -1.87
HOXC10Q9NYD6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXC10Q9NYD6 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXC10Q9NYD6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
HOXC10Q9NYD6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 RNU6-263P-201ENST00000363811 107 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 MIR887-201ENST00000401258 79 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 RNA5SP38-201ENST00000410750 119 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC063976.3-201ENST00000426849 329 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 RPL23AP58-201ENST00000440453 469 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC004865.1-201ENST00000442276 1003 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 HMGB3P6-201ENST00000444896 598 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AL050341.1-201ENST00000447743 313 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AL096803.2-201ENST00000450032 677 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 RPL30P14-201ENST00000482744 348 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 PRELID3BP4-201ENST00000515476 571 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 RNU6-488P-201ENST00000515918 99 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 MIR4319-201ENST00000577285 85 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC024153.1-201ENST00000603103 365 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC015871.2-201ENST00000603605 948 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AP004247.3-201ENST00000608682 624 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC231759.1-201ENST00000616455 597 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AL356118.1-201ENST00000635272 1078 ntBASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HOXC10Q9NYD6 AC090740.1-201ENST00000623193 2262 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 U3.11-201ENST00000364476 212 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 SSXP9-201ENST00000417503 292 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AL009174.1-201ENST00000426577 416 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AC109583.1-201ENST00000432156 268 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AL929288.2-201ENST00000446368 407 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AL096829.2-201ENST00000446582 742 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 CDC42P1-201ENST00000456658 548 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 RPS4XP6-201ENST00000477670 797 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 RPL21P131-201ENST00000497298 483 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 SNORA64.4-201ENST00000516632 81 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 HIGD1AP6-201ENST00000521833 279 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 OR10V3P-201ENST00000525712 725 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AC004217.3-201ENST00000551552 878 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AADACP1-206ENST00000561502 1193 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 HMGB1P6-201ENST00000569046 646 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AC008687.2-201ENST00000597865 520 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AP002906.1-201ENST00000603405 233 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AC112503.2-201ENST00000609005 552 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AC008083.4-201ENST00000615076 444 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AL360181.4-201ENST00000621752 134 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AL590396.2-201ENST00000636511 1041 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 MAPK10-322ENST00000641485 4530 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HOXC10Q9NYD6 AC233263.6-201ENST00000631132 1963 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 SGO1P2-201ENST00000429458 1589 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC062016.1-201ENST00000355719 319 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 NACA3P-201ENST00000359690 648 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 SNORD56.5-201ENST00000364281 72 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RNU6-354P-201ENST00000383862 107 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RNU6-610P-201ENST00000384264 107 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RNU6-272P-201ENST00000411028 104 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RPS7P13-201ENST00000413955 498 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC019097.1-201ENST00000424783 735 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 UBE2V1P6-201ENST00000430840 422 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RPS26P30-201ENST00000443431 335 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AL162389.1-201ENST00000449233 177 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 AC108938.1-201ENST00000451204 136 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RN7SL429P-201ENST00000479090 223 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RN7SL432P-201ENST00000484057 298 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RN7SL489P-201ENST00000486185 223 ntBASIC3.34□□□□□ -1.87
HOXC10Q9NYD6 RN7SL327P-201ENST00000488659 223 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms