Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC108467.2-201ENST00000617640 1597 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 AC092326.2-201ENST00000624772 1561 ntBASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIN7CQ9NUP9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 PNPT1P2-201ENST00000456768 2050 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC067945.1-201ENST00000342609 618 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 Y_RNA.6-201ENST00000362350 114 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 RNU6-517P-201ENST00000384362 110 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 RNU1-44P-201ENST00000384453 163 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AL121834.1-202ENST00000404494 277 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 RN7SKP267-201ENST00000410381 285 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 USP9YP9-201ENST00000429406 715 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 MTCO2P11-201ENST00000431069 680 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AL662791.1-201ENST00000441992 928 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC016696.1-201ENST00000446949 318 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC132479.1-201ENST00000449160 144 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC006480.1-201ENST00000449887 378 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC010493.1-201ENST00000513479 292 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 ERHP1-201ENST00000523006 310 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 FAM60DP-201ENST00000524174 632 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC011979.2-201ENST00000527568 352 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC135001.1-201ENST00000544546 283 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC128657.1-201ENST00000549459 145 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 MED28P6-201ENST00000558776 231 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 RPL23AP87-202ENST00000573039 466 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 MIR4480-201ENST00000582492 71 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 Mico1.1-201ENST00000611698 204 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC091953.3-201ENST00000623220 236 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC068137.3-201ENST00000639191 341 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC073869.6-201ENST00000640656 341 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AL133412.1-201ENST00000380194 2992 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 AC139769.1-204ENST00000472297 1931 ntBASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LIN7CQ9NUP9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RNU1-94P-201ENST00000362627 173 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 SNORD56.2-201ENST00000363242 71 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RNU6-511P-201ENST00000363496 107 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RNU1-39P-201ENST00000383897 165 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 MIR298-201ENST00000401212 88 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 TXNP7-201ENST00000406296 293 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AC016769.2-201ENST00000414815 475 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AL645608.4-201ENST00000423619 154 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AL360081.1-201ENST00000428299 555 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 MTND1P4-201ENST00000435196 415 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 SNRPGP5-201ENST00000456003 220 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RPL38P1-201ENST00000460914 211 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RPL7AP28-201ENST00000464513 571 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AC010631.1-201ENST00000474150 156 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RNU6-390P-201ENST00000516259 103 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RNU2-58P-201ENST00000516403 183 ntBASIC3.78□□□□□ -1.8
LIN7CQ9NUP9 RNU6-840P-201ENST00000517275 65 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms