Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SLC6A13Q9NSD5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SLC6A13Q9NSD5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 FGF7P2-201ENST00000332473 296 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 SNORA31-201ENST00000362607 130 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RNU6-1074P-201ENST00000383995 104 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RNU6-114P-201ENST00000384704 105 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RNY3P10-201ENST00000384764 102 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RN7SKP142-201ENST00000411236 328 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RPS7P13-201ENST00000413955 498 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RANP8-201ENST00000444720 713 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 SNRPFP4-201ENST00000456366 242 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 UBDP1-202ENST00000457888 382 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RNA5SP269-201ENST00000459032 137 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC105137.1-201ENST00000484355 562 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC068724.1-201ENST00000487100 792 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 RPL7P23-201ENST00000493874 747 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC096751.1-202ENST00000502691 1067 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AF131216.2-201ENST00000512316 564 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC091965.2-201ENST00000512324 613 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 FABP5P5-201ENST00000515537 406 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC087369.1-201ENST00000520775 996 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AP004242.1-201ENST00000533701 349 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 CYCSP29-201ENST00000533731 318 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC090877.1-201ENST00000561418 344 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC023575.1-201ENST00000580510 358 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC060771.1-201ENST00000582031 164 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC064807.4-201ENST00000607201 407 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC245008.1-201ENST00000608123 476 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AL590282.1-201ENST00000610379 1136 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC104010.1-201ENST00000616889 150 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC015967.1-201ENST00000619893 476 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC112200.1-201ENST00000625015 234 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 OR52H1-202ENST00000641796 1061 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 NCAPGP1-201ENST00000505112 1814 ntBASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SLC6A13Q9NSD5 MTCO1P9-201ENST00000505577 1534 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 FRG1BP-201ENST00000278882 761 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 RNU1-18P-201ENST00000363062 164 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 RNU6-1078P-201ENST00000364522 103 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 RNU6-533P-201ENST00000384144 107 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 MIR135A2-201ENST00000384854 100 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AL121871.1-201ENST00000443413 436 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AL360221.1-201ENST00000445989 335 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AC239367.2-201ENST00000447309 705 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 MTND1P29-201ENST00000448112 647 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AC234775.1-201ENST00000454247 670 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 RN7SL93P-201ENST00000463035 293 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 MTND4LP3-201ENST00000468320 276 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AL132838.2-201ENST00000492041 314 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AC112204.1-201ENST00000502591 103 ntBASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC6A13Q9NSD5 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms