Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL023807.1-201ENST00000407932 359 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 TPMTP3-201ENST00000411928 735 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 BX323014.1-201ENST00000412876 237 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RPS29P4-201ENST00000414733 161 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC245052.5-201ENST00000416320 649 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC012065.2-201ENST00000421295 375 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 HMGN2P31-201ENST00000432430 273 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 UBE2FP3-201ENST00000436366 524 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 MTND4P6-201ENST00000438297 472 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 TAF9P1-201ENST00000445421 515 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 TAF9P2-201ENST00000454958 515 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC097493.1-201ENST00000463958 372 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RPS15AP17-201ENST00000470598 390 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RPS4XP22-201ENST00000480755 780 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AL024509.2-201ENST00000493462 493 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 DSTNP2-201ENST00000504533 515 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 SAP18P1-201ENST00000512058 390 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 SNORD116-26-201ENST00000516006 96 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 RN7SKP116-201ENST00000516902 319 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC008127.2-201ENST00000549925 1075 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 LSM6P2-201ENST00000552208 177 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC084757.1-201ENST00000559987 490 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 ROCK1P1-201ENST00000573767 549 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 MIR7844-201ENST00000616161 122 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC092192.1-201ENST00000633154 1018 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 AC011978.2-201ENST00000569835 2054 ntBASIC3.56□□□□□ -1.84
SIX2Q9NPC8 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIX2Q9NPC8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 ELL2P4-201ENST00000446870 1376 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 SNORA51.6-201ENST00000384151 125 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 RNU6-1226P-201ENST00000384317 107 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC136624.1-201ENST00000400791 413 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 RNA5SP107-201ENST00000411358 122 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC069218.2-201ENST00000411665 344 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 RPL7P8-201ENST00000411964 730 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 MED14P1-201ENST00000430517 648 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC010153.1-201ENST00000432862 727 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AL360221.1-201ENST00000445989 335 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 MTCO2P7-201ENST00000446518 666 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 ZNF114P1-201ENST00000453500 292 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 TRBV26-201ENST00000456572 344 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 RPL7P15-201ENST00000461190 712 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC021678.1-201ENST00000505195 936 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC104057.1-201ENST00000515547 497 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 HIGD1AP10-201ENST00000527837 282 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC087276.1-201ENST00000529659 480 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC007115.1-201ENST00000546853 234 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC136618.2-201ENST00000575091 400 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 MIR5186-201ENST00000577504 120 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC015917.1-201ENST00000579654 510 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 MIR4644-201ENST00000579929 84 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 MIR4637-201ENST00000582405 84 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC004987.4-201ENST00000603383 338 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 MTCYBP22-201ENST00000603788 447 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC113194.1-201ENST00000606037 500 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC106028.5-201ENST00000610332 395 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 uc_338.1-201ENST00000612113 180 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AL158063.1-201ENST00000615349 536 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AL161637.1-201ENST00000622380 412 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 AC073476.4-201ENST00000628409 72 ntBASIC3.55□□□□□ -1.84
SIX2Q9NPC8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIX2Q9NPC8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms