Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 RNA5SP402-201ENST00000517148 110 ntBASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 COX6B1P6-201ENST00000522347 255 ntBASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AP003717.3-201ENST00000544832 1180 ntBASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AL356575.1-201ENST00000603008 283 ntBASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 AL160394.1-201ENST00000624765 724 ntBASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
KIAA1549Q9HCM3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 MIR1250-201ENST00000408098 113 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 RNA5SP344-201ENST00000411081 104 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC233981.1-201ENST00000423224 461 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC006548.1-201ENST00000427470 102 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC104308.1-201ENST00000454621 333 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 C1DP3-201ENST00000455013 423 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 RPS27AP9-201ENST00000477681 438 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC021146.7-201ENST00000509604 775 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 CCNHP1-201ENST00000513311 678 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC133963.2-201ENST00000513686 578 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 RNU1-61P-201ENST00000516107 151 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC104115.2-201ENST00000523026 687 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC004486.1-201ENST00000546846 233 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 YWHAZP1-201ENST00000556286 722 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 MIR3670-2-201ENST00000582974 65 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 MIR3670-1-201ENST00000584160 65 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 MIR3670-3-201ENST00000584855 65 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC104984.5-201ENST00000586878 94 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 HMGN2P28-201ENST00000606102 262 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC067747.1-201ENST00000608026 250 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 MIR3670-4-201ENST00000612260 65 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 CR381572.1-201ENST00000625098 102 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 MIR1291-201ENST00000627649 87 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 MIR21-201ENST00000362134 72 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 MIR142-201ENST00000384835 87 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 RAP1BP1-201ENST00000412709 553 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AL135786.1-201ENST00000415892 214 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC023128.2-201ENST00000420880 1223 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 TRIM60P18-201ENST00000441518 828 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 RPL31P20-201ENST00000449593 360 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AP000926.3-201ENST00000497201 299 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC026412.2-201ENST00000512270 1075 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC104986.1-201ENST00000517978 436 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC105137.2-201ENST00000569073 466 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AC009977.1-201ENST00000586015 570 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 AP001029.3-201ENST00000588063 596 ntBASIC2.07□□□□□ -2.08
KIAA1549Q9HCM3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 RNU1-51P-201ENST00000365345 176 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AL354719.1-201ENST00000406535 843 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 RPL23AP47-201ENST00000408017 460 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 SNORA3.2-201ENST00000408221 125 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 TOMM20P4-201ENST00000427861 435 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 RPL9P6-201ENST00000492764 598 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 IGKV2-36-201ENST00000519999 223 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AC090312.2-201ENST00000582687 378 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AC115085.1-201ENST00000588924 229 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AL133393.1-201ENST00000603277 287 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AC005021.1-201ENST00000608730 355 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 TUG1_1.1-201ENST00000610654 145 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 AL138880.2-201ENST00000616214 239 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 VN1R7P-201ENST00000619242 903 ntBASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
KIAA1549Q9HCM3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
KIAA1549Q9HCM3 RNA5SP492-201ENST00000411330 114 ntBASIC2.05□□□□□ -2.08
KIAA1549Q9HCM3 MTCYBP24-201ENST00000420387 1106 ntBASIC2.05□□□□□ -2.08
KIAA1549Q9HCM3 PSMA2P3-201ENST00000429685 675 ntBASIC2.05□□□□□ -2.08
KIAA1549Q9HCM3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.05□□□□□ -2.08
KIAA1549Q9HCM3 RPL39P40-201ENST00000445481 146 ntBASIC2.05□□□□□ -2.08
KIAA1549Q9HCM3 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.05□□□□□ -2.08
KIAA1549Q9HCM3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms