Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 Y_RNA.144-201ENST00000363521 113 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 U3.29-201ENST00000391296 212 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC009804.1-201ENST00000400949 179 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 HMGN1P24-201ENST00000412282 298 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC245054.2-201ENST00000415639 319 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AL121776.1-201ENST00000429337 372 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 RPL10P17-201ENST00000453852 316 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 RNU7-59P-201ENST00000459101 61 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 UBA52P7-201ENST00000486088 380 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC110792.2-201ENST00000510278 224 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 RNU6-709P-201ENST00000517257 104 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC027026.1-201ENST00000532323 742 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 FKBP1BP1-201ENST00000553366 325 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC006270.2-201ENST00000578523 652 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 BNIP3P25-201ENST00000596023 559 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC136443.5-201ENST00000603741 370 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 DPPA3P3-201ENST00000603842 430 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC025588.3-201ENST00000604182 274 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC245389.1-201ENST00000605141 529 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 Z98200.1-201ENST00000607298 470 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC091979.2-201ENST00000607514 214 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC116447.1-201ENST00000613153 453 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AL022401.1-201ENST00000619498 108 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.43□□□□□ -1.54
CBX8Q9HC52 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CBX8Q9HC52 AC008758.3-201ENST00000507003 1829 ntBASIC5.43□□□□□ -1.54
CBX8Q9HC52 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CBX8Q9HC52 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CBX8Q9HC52 MTND4P14-201ENST00000435799 1354 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CBX8Q9HC52 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CBX8Q9HC52 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CBX8Q9HC52 RN7SKP162-201ENST00000363605 345 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 RNA5SP132-201ENST00000364725 118 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CBX8Q9HC52 RNU6-641P-201ENST00000384006 107 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 U3.25-201ENST00000391209 220 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 MIR548K-201ENST00000408406 116 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 RNU6-603P-201ENST00000411403 107 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 RPL31P2-201ENST00000413849 377 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 OR6C66P-201ENST00000414917 930 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 HMGB3P11-201ENST00000440127 604 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 RPL34P20-201ENST00000442771 351 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 AC016696.1-201ENST00000446949 318 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 RNU6-1208P-201ENST00000459588 107 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 RN7SL817P-201ENST00000480777 288 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 RN7SL184P-201ENST00000488308 297 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 RNU6-1088P-201ENST00000516850 104 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 RNA5SP392-201ENST00000516905 112 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 RNA5SP503-201ENST00000517047 117 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 IGKV2-18-201ENST00000522607 343 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 HIGD1AP5-201ENST00000529959 259 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 AC109635.4-202ENST00000531666 412 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 AL133153.1-201ENST00000557756 303 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 AC133644.2-201ENST00000608142 540 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 AC010205.1-201ENST00000616668 449 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 AC140113.4-201ENST00000622087 222 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 AC011155.2-201ENST00000623202 216 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 AP000843.1-201ENST00000624880 701 ntBASIC5.42□□□□□ -1.54
CBX8Q9HC52 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CBX8Q9HC52 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.42□□□□□ -1.54
CBX8Q9HC52 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms