Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL009028.1-201ENST00000604895 802 ntBASIC2.41□□□□□ -2.02
LRTM1Q9HBL6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.41□□□□□ -2.02
LRTM1Q9HBL6 AL590808.1-201ENST00000618696 141 ntBASIC2.41□□□□□ -2.02
LRTM1Q9HBL6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LRTM1Q9HBL6 AC010297.1-201ENST00000623948 149 ntBASIC2.41□□□□□ -2.02
LRTM1Q9HBL6 CRYM-AS1-204ENST00000637983 556 ntBASIC2.41□□□□□ -2.02
LRTM1Q9HBL6 AC087565.3-202ENST00000642085 1603 ntBASIC2.41□□□□□ -2.02
LRTM1Q9HBL6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LRTM1Q9HBL6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
LRTM1Q9HBL6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LRTM1Q9HBL6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
LRTM1Q9HBL6 RNA5SP456-201ENST00000364002 114 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 RNU4-31P-201ENST00000384211 141 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 RNA5SP181-201ENST00000410246 98 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 RABEPKP1-201ENST00000440529 1026 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AP000936.2-201ENST00000447151 681 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 snoU13.4-201ENST00000458916 104 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC004062.1-201ENST00000509926 645 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC087373.1-201ENST00000524920 491 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC245036.5-201ENST00000596330 847 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AL133507.1-201ENST00000605269 557 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 CUL1P1-201ENST00000509510 2425 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 AL049780.3-201ENST00000624612 1583 ntBASIC2.4□□□□□ -2.03
LRTM1Q9HBL6 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 FAM133CP-201ENST00000332869 704 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 RNA5SP139-201ENST00000364340 117 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 U8.8-201ENST00000365399 135 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 AL139039.1-201ENST00000401900 692 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 MTCO3P4-201ENST00000419236 787 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 AC098826.1-201ENST00000433943 471 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 HMGB1P18-201ENST00000438801 619 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 HMGB1P48-201ENST00000446155 598 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 RPL23AP15-201ENST00000450202 459 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 SNORD116-30-201ENST00000516468 85 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 SNORA31.20-201ENST00000517111 133 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 NBEAP1-201ENST00000554452 979 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 AC107954.1-201ENST00000565906 727 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 COX6CP3-201ENST00000580869 223 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 AC018755.4-201ENST00000619715 454 ntBASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LRTM1Q9HBL6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 U8.2-201ENST00000363156 134 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 RNU6-452P-201ENST00000384406 107 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 RNA5SP38-201ENST00000410750 119 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 TOMM20P4-201ENST00000427861 435 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 LSM1P1-201ENST00000438629 273 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 CIR1P1-201ENST00000524055 1133 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 CKS1BP1-201ENST00000555221 240 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 VN1R7P-201ENST00000619242 903 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 AC103798.2-201ENST00000624292 632 ntBASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.38□□□□□ -2.03
LRTM1Q9HBL6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms