Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 OR5BM1P-201ENST00000512021 366 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AC010265.1-201ENST00000513509 211 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 MTCO1P49-201ENST00000523429 802 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AP000790.1-201ENST00000528891 737 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AC090616.2-202ENST00000584248 222 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 MIR4276-201ENST00000584832 70 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AC007687.1-201ENST00000602704 304 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AC010738.1-201ENST00000604970 987 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AC018714.1-201ENST00000605028 208 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 MIR4496-201ENST00000635896 61 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 MKKS-204ENST00000639674 192 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 DCAF13P1-201ENST00000495256 1330 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AL079305.1-201ENST00000623159 3008 ntBASIC3.89□□□□□ -1.79
UPF2Q9HAU5 AC021755.1-201ENST00000559747 1447 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 RNA5SP167-201ENST00000365461 116 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AL450338.1-201ENST00000407987 512 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 PIGPP2-201ENST00000411569 458 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC012498.1-201ENST00000424037 437 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 PSMA2P3-201ENST00000429685 675 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 RPL31P54-201ENST00000429803 370 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AL050321.1-201ENST00000432363 400 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 THAP5P1-201ENST00000439089 262 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 RPL23AP15-201ENST00000450202 459 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 snoU13.7-201ENST00000459220 104 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 RPL7P38-201ENST00000488396 739 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 SNX5P1-201ENST00000505757 1041 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 RN7SKP43-201ENST00000516173 320 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 RNY4P37-201ENST00000516225 96 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 RN7SKP277-201ENST00000516895 283 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 BNIP3P5-201ENST00000562290 498 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC138915.2-201ENST00000569776 97 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 OR4K7P-201ENST00000580232 945 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC022069.1-201ENST00000582910 658 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AL020997.2-201ENST00000602607 184 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AL592221.1-201ENST00000605266 382 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AL354976.1-201ENST00000613843 387 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 AC006065.5-201ENST00000623427 349 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 OR8B1P-202ENST00000641132 1178 ntBASIC3.88□□□□□ -1.79
UPF2Q9HAU5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPF2Q9HAU5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC093010.3-201ENST00000570269 15214 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 Y_RNA.126-201ENST00000363382 111 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AL021407.1-201ENST00000404531 386 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 RNU2-21P-201ENST00000410368 188 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 RNA5SP274-201ENST00000410484 108 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 RN7SKP159-201ENST00000410657 292 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 RPP40P1-201ENST00000426762 456 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AL354941.1-201ENST00000438600 464 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 MTCYBP34-201ENST00000439552 670 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AC092641.1-201ENST00000440229 772 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 UBE2D3P4-201ENST00000441973 436 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 RSL24D1P3-201ENST00000449255 495 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 BZW1P2-201ENST00000473537 826 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 LINC00888-204ENST00000487386 421 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.87□□□□□ -1.79
UPF2Q9HAU5 LTV1P1-201ENST00000510683 1237 ntBASIC3.87□□□□□ -1.79
UPF2Q9HAU5 PTGES3P3-201ENST00000511479 482 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms