Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 MIR30B-201ENST00000384850 88 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 MIR607-201ENST00000385241 96 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 MIR887-201ENST00000401258 79 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RN7SKP156-201ENST00000410308 342 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RNU2-47P-201ENST00000410649 186 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RPL7P30-201ENST00000420888 709 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC079780.1-201ENST00000428259 207 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 HSPE1P28-201ENST00000443139 211 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RNU7-136P-201ENST00000458819 69 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RPS4XP10-201ENST00000465034 731 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AP004217.1-201ENST00000480579 346 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC114981.1-201ENST00000503897 678 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC034244.1-201ENST00000507687 207 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC112673.1-201ENST00000513168 575 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC006499.2-201ENST00000513470 337 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 APOOP4-201ENST00000513530 597 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC026402.1-201ENST00000513642 170 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RNA5SP76-201ENST00000516277 87 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RN7SKP287-201ENST00000516546 266 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RNU5A-4P-201ENST00000516588 111 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 DEFB131D-201ENST00000526803 184 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 DUXAP1-201ENST00000556632 463 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC006116.10-201ENST00000591836 581 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AL606490.9-201ENST00000603331 271 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC011468.4-201ENST00000603942 409 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC093424.1-201ENST00000604999 338 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 TUSC7.1-201ENST00000610969 165 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 AC009159.2-201ENST00000617603 606 ntBASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VIPAS39Q9H9C1 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC090337.1-201ENST00000579651 2074 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 RNU4-28P-201ENST00000364739 141 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 RNU6-952P-201ENST00000391164 108 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AL031679.1-201ENST00000400616 525 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 RAD23BP2-201ENST00000416003 1207 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 EI24P1-201ENST00000416584 867 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 OR8F1P-201ENST00000425243 930 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC007742.1-201ENST00000425789 329 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 C4BPAP2-201ENST00000428434 478 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 MTND1P32-201ENST00000433043 938 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 RPL21P112-201ENST00000434403 463 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 ELOCP26-201ENST00000436067 329 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 YWHAZP7-201ENST00000436906 631 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 MTND4P6-201ENST00000438297 472 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AL662791.1-201ENST00000441992 928 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 EEF1E1P1-201ENST00000446998 430 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 MTCO3P11-201ENST00000455103 774 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AP001992.1-205ENST00000462248 379 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 CEACAMP10-202ENST00000495431 496 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC010625.1-201ENST00000511296 403 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC093853.1-201ENST00000515689 483 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC007991.1-201ENST00000522680 631 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 CYCSP2-201ENST00000558168 301 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AL031281.1-201ENST00000604049 488 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 AC127502.3-201ENST00000636170 1206 ntBASIC3.32□□□□□ -1.88
VIPAS39Q9H9C1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms